fstrozzi / FastoolLinks
Simple and quick FastQ and FastA tool for file reading and conversion
☆17Updated 11 years ago
Alternatives and similar repositories for Fastool
Users that are interested in Fastool are comparing it to the libraries listed below
Sorting:
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- This is an unsupported fork of the PacBio blasr aligner. It contains my (very beta) optimizations and new functionality. It may disappea…☆22Updated 6 years ago
- Tools to process LIANTI sequence data☆23Updated 6 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Updated 9 years ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- A program for summarising CpG methylation patterns☆20Updated 8 years ago
- ☆51Updated 6 years ago
- 10x Genomics Reads Simulator☆45Updated last year
- Linked-Read Alignment Tool☆27Updated 6 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆35Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated 2 years ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- ☆31Updated 3 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Updated 5 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Population-wide Deletion Calling☆35Updated 4 months ago
- Profile HMM-based hybrid error correction algorithm for long reads☆21Updated 7 years ago
- UCSC Nanopore☆43Updated 6 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- Analysis tool for Nanopore sequencing data☆34Updated 6 years ago
- Multi-sample transcriptome assembly from RNA-Seq☆25Updated 7 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 4 years ago
- Perl scripts for working with the GFF format☆16Updated 14 years ago