sebhtml / FastDemultiplexerLinks
A sequence demultiplexer for the Illumina HiSeq technology
☆21Updated 12 years ago
Alternatives and similar repositories for FastDemultiplexer
Users that are interested in FastDemultiplexer are comparing it to the libraries listed below
Sorting:
- Simple FASTQ quality assessment using Python☆109Updated 4 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- ☆82Updated 3 years ago
- NextSeq specific bcl2fastq2 wrapper.☆55Updated 4 years ago
- ☆78Updated 11 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 4 months ago
- Maximum likelihood demultiplexing☆47Updated 6 months ago
- An awk-like VCF parser☆56Updated last year
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- Platypus Variant Caller☆108Updated last year
- A tool to benchmark mappers and different parameters within minutes☆44Updated 6 years ago
- UCSC Nanopore group's software pipeline for reference-based sequence analysis☆55Updated 9 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 3 months ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated last year
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆91Updated 4 years ago
- Galaxy RNA workbench☆40Updated 4 years ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- My bioinfo toolbox☆50Updated 7 months ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated 2 months ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆144Updated 8 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆53Updated 8 years ago
- Toolkit for processing TAB-delimited format☆62Updated 10 months ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 7 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- Small utilities for working with fastq sequence files.☆124Updated 2 years ago
- High-performance error correction for Illumina resequencing data☆72Updated 9 years ago
- Relevant papers for CNV and SV approaches☆94Updated 10 months ago