lh3 / bfc
High-performance error correction for Illumina resequencing data
☆69Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for bfc
- Filtering and profiling of next-generational sequencing data using region-specific rules☆74Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- Error correction for Oxford Nanopore data☆47Updated 3 years ago
- Structural Variant Index☆70Updated this week
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆65Updated last year
- Maximum likelihood demultiplexing☆46Updated last year
- UCSC Nanopore☆43Updated 5 years ago
- ☆78Updated 10 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆68Updated 2 years ago
- An awk-like VCF parser☆54Updated 10 months ago
- 10x Genomics Reads Simulator☆45Updated 10 months ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- Automatically optimise three of Velvet's assembly parameters.☆47Updated 2 years ago
- Read visualizer for structural variants☆81Updated 6 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆108Updated 2 months ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 3 years ago
- PHAST☆68Updated this week
- Experimental pipeline for correcting nanopore reads☆39Updated 7 years ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆27Updated 3 years ago
- Same species annotation lift over pipeline.☆96Updated last year
- Using kallisto for metagenomic analysis