Go implementation of ntHash
☆20Sep 16, 2021Updated 4 years ago
Alternatives and similar repositories for nthash
Users that are interested in nthash are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ntHash implementation in Rust☆36Jul 12, 2024Updated last year
- Identifying repeats in high-throughput sequencing data☆16Apr 12, 2024Updated last year
- A Brand New LSH: The fly’s olfactory circuits algorithm☆11May 2, 2018Updated 7 years ago
- Histosketching Using Little Kmers☆57May 25, 2023Updated 2 years ago
- Radix sorting in Go☆10Feb 4, 2019Updated 7 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- HTTP Keyserver Protocol (HKP) handlers☆13Apr 25, 2018Updated 7 years ago
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Apr 24, 2025Updated 11 months ago
- De Bruijn graph representation in low memory☆35Jul 6, 2024Updated last year
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 4 years ago
- A database for signatures of public genomic sources☆18Jan 1, 2026Updated 2 months ago
- golang port of Gimli, https://gimli.cr.yp.to, a 384-bit permutation designed to achieve high security with high performance across a broa…☆17Jun 20, 2018Updated 7 years ago
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- Super low overhead application level metrics☆24Oct 12, 2021Updated 4 years ago
- This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye R…☆18May 21, 2017Updated 8 years ago
- Flexible omics pipeline☆17Oct 16, 2025Updated 5 months ago
- Finding putative exons and constructing splicegraphs using Trans-ABySS contigs☆11Nov 8, 2018Updated 7 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 7 years ago
- kaamer - protein identification based on amino acid kmers☆12Mar 7, 2023Updated 3 years ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Dec 6, 2024Updated last year
- ☆18Jul 9, 2018Updated 7 years ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Apr 23, 2021Updated 4 years ago
- LSH index for approximate set containment search☆61Jun 27, 2022Updated 3 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 6 years ago
- Graphs in go☆19Dec 22, 2022Updated 3 years ago
- A layer of convenience over the Go stdlib☆22Oct 10, 2025Updated 5 months ago
- ☆22Jul 28, 2022Updated 3 years ago
- A socket server which reads events from an event source and forwards them to the user clients when appropriate☆18Feb 18, 2018Updated 8 years ago
- Sir, is a tcp proxy that checks for regressions in your services/apps.☆12Mar 20, 2024Updated 2 years ago
- Reader and writer of HDF5 files☆18Jul 15, 2017Updated 8 years ago
- Yet Another RPC for Go☆10Jun 21, 2018Updated 7 years ago
- PROJECT DEPRECATED! Instead see http://flowbase.org and http://scipipe.org for libraries built on this pattern☆15May 12, 2017Updated 8 years ago
- Sequence Distance Graph framework: graph + reads + mapping + analysis☆25Jun 4, 2022Updated 3 years ago
- Interpolation search☆12Oct 15, 2021Updated 4 years ago
- Disty McMatrixface - compute a distance matrix from a core genome alignment file☆14Mar 15, 2023Updated 3 years ago
- Fast approximation of similarity for sets of very different sizes☆20Mar 8, 2022Updated 4 years ago
- ☆21Dec 26, 2025Updated 2 months ago
- ☆15Nov 30, 2023Updated 2 years ago