gkno / gkno_launcherLinks
The gkno launcher for executing tools or pipelines
☆31Updated 8 years ago
Alternatives and similar repositories for gkno_launcher
Users that are interested in gkno_launcher are comparing it to the libraries listed below
Sorting:
- Tools for next-generation sequencing analysis☆88Updated 6 years ago
- Tools for bam file processing☆55Updated 10 years ago
- SV detection from paired end reads mapping☆38Updated 14 years ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- Utilities to create and analyze gVCF files☆38Updated 8 years ago
- Assembly Based ReAligner☆74Updated 7 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- Fast spliced aligner with low memory requirements☆41Updated 9 years ago
- An awk-like VCF parser☆56Updated last year
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆56Updated 8 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated last week
- Genome-wide reconstruction of complex structural variants☆39Updated 3 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- ☆37Updated 4 years ago
- Browser based application for viewing bam alignments☆56Updated 8 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Updated 11 years ago
- High-performance error correction for Illumina resequencing data☆72Updated 9 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Updated 9 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆53Updated 8 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- CRAM format specification and java API for read data.☆60Updated 6 years ago
- 10x Genomics Reads Simulator☆45Updated last year