lexnederbragt / INF-BIO9120_fall2013_de_novo_assemblyLinks
Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013
☆37Updated 11 years ago
Alternatives and similar repositories for INF-BIO9120_fall2013_de_novo_assembly
Users that are interested in INF-BIO9120_fall2013_de_novo_assembly are comparing it to the libraries listed below
Sorting:
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Guide to transcriptome assembly & analysis☆21Updated 8 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- ☆19Updated 8 years ago
- Public Health England SNP calling pipeline.☆36Updated 6 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- reference free variant assembly☆33Updated 2 years ago
- blast, shmlast☆22Updated 4 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆15Updated 3 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 5 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Updated 8 years ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 5 years ago
- Reproducible Phylogenomics☆22Updated 9 years ago
- ☆18Updated 9 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- de novo targeted gene assembly☆23Updated 4 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last week
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 7 months ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Updated 6 years ago
- ☆20Updated 10 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- Merge transcriptome assemblies☆31Updated 8 years ago
- A talk on Makesfiles in bioinformatics☆26Updated 12 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆22Updated 7 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 3 years ago
- Using kallisto for metagenomic analysis☆50Updated 8 years ago
- ☆11Updated 2 years ago