Segment Anything Model API
☆116Feb 15, 2026Updated 6 months ago
Alternatives and similar repositories for samapi
Users that are interested in samapi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QuPath extension for Segment Anything Model (SAM)☆136Feb 15, 2026Updated 6 months ago
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.☆95Jul 6, 2026Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated last month
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆31Jan 19, 2026Updated 7 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆30Dec 3, 2025Updated 8 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆20Aug 19, 2026Updated last week
- A proof of concept to run python segmentations and recovering the results within QuPath☆19Feb 13, 2021Updated 5 years ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated last month
- ilastik plugin for napari☆15Mar 2, 2026Updated 5 months ago
- ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)☆11Feb 15, 2022Updated 4 years ago
- ImgLib2 RealTransform brought to QuPath☆35Mar 12, 2026Updated 5 months ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆87Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Lab for quantitative bioimage analysis experiments in Python☆21Feb 16, 2026Updated 6 months ago
- ☆24May 16, 2023Updated 3 years ago
- A napari plugin for zarr backed OME-NGFF images☆54Aug 18, 2026Updated last week
- This repository contains the implementation of TILAb-score as described in the original paper.☆19Oct 3, 2019Updated 6 years ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 9 months ago
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated last year
- Template to help create a new QuPath extension☆21Apr 23, 2026Updated 4 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- A fully scalable robust image feature extraction library.☆29Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This is the official implementation of "An optimized two-stage cascaded deep neural network for adrenal segmentation on CT images".☆11Apr 13, 2023Updated 3 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 8 months ago
- Accurate and efficient spot detection for microscopy data☆141Jun 8, 2026Updated 2 months ago
- ☆236Jul 30, 2026Updated last month
- PAthological QUpath Obsession - QuPath and Python conversations☆137Apr 30, 2026Updated 4 months ago
- Time arrow prediction for live-cell microscopy☆22Jun 17, 2024Updated 2 years ago
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆24Jul 7, 2026Updated last month
- A python package for fitting splines.☆24Jul 27, 2026Updated last month
- Toolkit to help develop and run QuPath scripts from Eclipse and other IDEs, including over remote connections. (See README.md for more in…☆17Aug 19, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆122Jan 24, 2025Updated last year
- ☆39Mar 22, 2024Updated 2 years ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆20Jul 8, 2024Updated 2 years ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆99Mar 24, 2026Updated 5 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated last year
- Efficient 3D interactive segmentation with the nnU-Net☆12Jun 15, 2022Updated 4 years ago