ksugar / samapiLinks
Segment Anything Model API
☆107Updated last month
Alternatives and similar repositories for samapi
Users that are interested in samapi are comparing it to the libraries listed below
Sorting:
- QuPath extension for Segment Anything Model (SAM)☆126Updated 6 months ago
- Codebase for "A Foundation Model for Cell Segmentation"☆174Updated 2 months ago
- ☆208Updated last week
- ☆73Updated 3 weeks ago
- PAthological QUpath Obsession - QuPath and Python conversations☆133Updated 5 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆84Updated last year
- multimodal whole slide image registration in a graph structure☆100Updated last year
- Cloud-based data annotation tools for biological images☆84Updated last year
- Piecewise alignment for layers of mosaics☆35Updated 5 months ago
- An open-source digital pathology based rapid image annotation tool☆90Updated last week
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Updated 2 months ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- TiffSlide - cloud native openslide-python replacement based on tifffile☆104Updated 8 months ago
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆139Updated this week
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- Virtual Alignment of pathoLogy Image Series☆205Updated 7 months ago
- Open source Python library for building bioimage analysis pipelines☆188Updated this week
- ☆91Updated 3 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆37Updated 2 weeks ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆133Updated this week
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.☆86Updated 3 weeks ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆162Updated last week
- Hibou: Foundational Models for Pathology☆76Updated last year
- QuPath extension for Cellsparse☆19Updated 9 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆141Updated last year
- A Girder plugin for pathology image annotations and analysis.☆78Updated 3 weeks ago
- Segment Anything for Histopathology☆57Updated 3 months ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆84Updated 2 months ago
- ☆36Updated 10 months ago