ImgLib2 RealTransform brought to QuPath
☆35Mar 12, 2026Updated 5 months ago
Alternatives and similar repositories for qupath-extension-warpy
Users that are interested in qupath-extension-warpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.☆95Jul 6, 2026Updated last month
- QuPath documentation☆23Aug 21, 2026Updated last week
- The official QuPath extension for InstanSeg☆29Jul 2, 2026Updated last month
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- QuPath extension to interactively align images☆29Aug 7, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A visualization app for 3D-registered data processed in ABBA and QuPath☆21Oct 21, 2022Updated 3 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago
- QuPath extension to run StarDist nucleus detection☆49Jun 25, 2026Updated 2 months ago
- ☆24Updated this week
- QuPath extension for Segment Anything Model (SAM)☆136Feb 15, 2026Updated 6 months ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated last year
- Toolkit to help develop and run QuPath scripts from Eclipse and other IDEs, including over remote connections. (See README.md for more in…☆17Aug 19, 2020Updated 6 years ago
- Template to help create a new QuPath extension☆21Apr 23, 2026Updated 4 months ago
- Heardle made using Spotify's Web API☆15Jun 25, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A tool for manual pointwise deformable registration using bigdataviewer.☆37Aug 6, 2026Updated 3 weeks ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆23Jun 10, 2025Updated last year
- Algorithmic and Utility Extensions for the Imaris Program☆21Updated this week
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆30Dec 3, 2025Updated 8 months ago
- A proof of concept to run python segmentations and recovering the results within QuPath☆19Feb 13, 2021Updated 5 years ago
- Generates simulated confocal data from a ground truth signal☆11Aug 16, 2022Updated 4 years ago
- Bio-Formats image file format to raw format converter☆111Aug 4, 2026Updated 3 weeks ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆42Jun 29, 2026Updated 2 months ago
- Segment Anything Model API☆116Feb 15, 2026Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆17Sep 26, 2021Updated 4 years ago
- QuPath - Open-source bioimage analysis for research☆1,430Updated this week
- Compute the neighborhood consolidation matrix and identify SHRs☆15Jun 12, 2025Updated last year
- Closed-loop feedback optogenetic system☆10Apr 5, 2022Updated 4 years ago
- Image-to-Image Translation in PyTorch☆24Sep 21, 2023Updated 2 years ago
- PAthological QUpath Obsession - QuPath and Python conversations☆137Apr 30, 2026Updated 4 months ago
- ☆236Jul 30, 2026Updated last month
- ☆15Jun 27, 2025Updated last year
- Image processing algorithms for ImgLib2☆24Feb 21, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ABBA, controlled from python☆21Jul 22, 2026Updated last month
- A minimal dependency napari plugin giving access to scikit-image functions☆23Jul 6, 2026Updated last month
- The ImageJ wiki☆30Updated this week
- ☆40Sep 4, 2025Updated 11 months ago
- Stitch multiple Visium slides together☆17Oct 16, 2025Updated 10 months ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- Advanced Tool for Labeling And Segmentation☆41Oct 21, 2024Updated last year