rosalindfranklininstitute / RedLionfishLinks
☆31Updated last year
Alternatives and similar repositories for RedLionfish
Users that are interested in RedLionfish are comparing it to the libraries listed below
Sorting:
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 3 months ago
- ☆51Updated 3 months ago
- Command-line client for Fractal☆46Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- ☆15Updated 2 weeks ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- A template repo used to make new napari plugins☆26Updated last week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆80Updated 3 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Track and lineage visualization with btrack and Napari☆45Updated 9 months ago
- Browse your OMERO database from within napari.☆38Updated this week
- A napari plugin for zarr backed OME-NGFF images☆33Updated 2 weeks ago
- Python libraries for loading, running and packaging bioimage.io models☆33Updated 2 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆76Updated last month
- An Ilastik-like interactive pixel classifier.☆16Updated 11 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆17Updated last week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 3 months ago
- Running compute-intense parts of BigStitcher distributed☆26Updated 2 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 3 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 3 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Accurate and efficient spot detection for microscopy data☆92Updated last week