uhlmanngroup / ShapeEmbedLiteLinks
ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis
☆20Updated 3 months ago
Alternatives and similar repositories for ShapeEmbedLite
Users that are interested in ShapeEmbedLite are comparing it to the libraries listed below
Sorting:
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- Time arrow prediction for live-cell microscopy☆21Updated last year
- ☆22Updated 7 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆19Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last week
- A template repo used to make new napari plugins☆31Updated last week
- Command-line client for Fractal☆48Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- dask empowered fast4dreg☆15Updated last year
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- A napari plugin for clustering objects according to their properties.☆90Updated 2 weeks ago
- A platform for compiling, analyzing, and exploring tracking data☆48Updated last week
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Updated 3 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 4 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 9 months ago
- Process and analyze surfaces using vedo in napari.☆25Updated last year
- StarDist plugin for napari☆38Updated last year
- Cell tracking and segmentation software☆168Updated last week
- Track and lineage visualization with btrack and Napari☆45Updated 4 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 2 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 2 months ago
- ☆25Updated 2 years ago
- ☆41Updated this week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- ☆33Updated 9 months ago
- ☆12Updated 5 months ago