TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.
☆24Jan 5, 2023Updated 3 years ago
Alternatives and similar repositories for TissUUmapsCore
Users that are interested in TissUUmapsCore are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆68Dec 2, 2025Updated 4 months ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated 8 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- ☆26Mar 30, 2026Updated last week
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated 8 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- ☆27Oct 12, 2024Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 4 months ago
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated 7 months ago
- Scientific Dataset Quality Control and Data Exploration Tool☆21Apr 1, 2026Updated last week
- Python package to export tensorflow models as DeepImageJ bundled models☆17Aug 10, 2022Updated 3 years ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- SurGen: 1020 H&E-stained Whole Slide Images With Survival and Genetic Markers☆21Nov 2, 2025Updated 5 months ago
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆19May 18, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆19Apr 6, 2022Updated 4 years ago
- Aligning images acquired with the IBEX microscopy imaging technique☆20Mar 5, 2026Updated last month
- ☆13Aug 16, 2024Updated last year
- Google Colab notebook for Cellpose☆10Aug 21, 2025Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆90Updated this week
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Apr 1, 2026Updated last week
- SimTriplet: PyTorch Implementation☆27Mar 12, 2021Updated 5 years ago
- Notes for a workshop on using git and github☆11Dec 13, 2019Updated 6 years ago
- 🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Pe…☆31Mar 25, 2026Updated 2 weeks ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Feature extraction from GEOJson nuclei and tissue segmentation maps☆19Jun 23, 2025Updated 9 months ago
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- ☆13Feb 27, 2024Updated 2 years ago
- ☆10Apr 30, 2019Updated 6 years ago
- Spatial omics analysis and visualization library☆24Updated this week
- ☆34Oct 10, 2025Updated 6 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- A probabilistic cell typing algorithm for spatial transcriptomics.☆25Nov 6, 2025Updated 5 months ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Deep learning based spot detection for FISH images.☆34Jan 7, 2026Updated 3 months ago
- ☆12Mar 1, 2026Updated last month
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 6 years ago
- ☆199Jul 23, 2025Updated 8 months ago
- GLSL Shaders on OpenSeadragon zoomable tiles or any other image viaWebGL☆40Mar 13, 2023Updated 3 years ago
- Simple R script for plotting ideograms and annotating with bed files.☆12Sep 21, 2015Updated 10 years ago
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆16Jun 2, 2025Updated 10 months ago