TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.
☆23Jan 5, 2023Updated 3 years ago
Alternatives and similar repositories for TissUUmapsCore
Users that are interested in TissUUmapsCore are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆73Oct 12, 2026Updated 2 weeks ago
- 🌸 Breast epithelium segmentation through IHC-guided supervision☆11Apr 23, 2024Updated 2 years ago
- Bash scripts to simplify your life (let's hope so!)☆12Jul 21, 2025Updated last year
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- A list of awesome bioimage analysis challenges☆10Feb 1, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Materials for the advanced image registration section of the "Advanced methods in bioimage analysis" EMBO 2023 course☆10Sep 15, 2023Updated 3 years ago
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated last year
- ☆28Oct 12, 2024Updated 2 years ago
- scDrug: From scRNA-seq to Drug Repositioning☆46May 8, 2023Updated 3 years ago
- Python package to export tensorflow models as DeepImageJ bundled models☆17Aug 10, 2022Updated 4 years ago
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated last year
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 4 years ago
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A end-to-end scRNA-seq analysis pipeline for cross-group comparison☆20Sep 20, 2026Updated last month
- An OpenSeadragon plugin that adds HTML overlay capability.☆14Oct 28, 2022Updated 4 years ago
- A QuPath extension for working with Deep Java Library (https://djl.ai)☆10Apr 23, 2026Updated 6 months ago
- R API and htmlwidget for Vitessce☆46Aug 13, 2025Updated last year
- ☆13Feb 27, 2024Updated 2 years ago
- Aligning images acquired with the IBEX microscopy imaging technique☆20Jun 28, 2026Updated 4 months ago
- ☆20Apr 6, 2022Updated 4 years ago
- A napari plugin for clustering objects according to their properties.☆91Updated this week
- Color Deconvolution for quantification of histological staining☆12Dec 18, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆22Oct 20, 2026Updated last week
- RAnking Markers for CEll Segmentation☆12Feb 22, 2022Updated 4 years ago
- ☆13Aug 16, 2024Updated 2 years ago
- Code for the blogpost showing how to use Paquo to interact with, and classify, objects in QuPath with machine learning☆10Sep 6, 2022Updated 4 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- ☆33Apr 29, 2026Updated 6 months ago
- Feature extraction from GEOJson nuclei and tissue segmentation maps☆19Jun 23, 2025Updated last year
- SimTriplet: PyTorch Implementation☆27Mar 12, 2021Updated 5 years ago
- A simple web application for for viewing and navigating pathology whole-slide-images in your browser.☆16Sep 22, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A probabilistic cell typing algorithm for spatial transcriptomics.☆26Oct 20, 2026Updated last week
- Malva algorithm for indexing and index querying☆26Oct 16, 2026Updated 2 weeks ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- Process and analyze surfaces using vedo in napari.☆26May 13, 2024Updated 2 years ago
- comseg☆25Feb 6, 2025Updated last year
- GPU accelerated post-processing for 2D or 3D imaging spatial transcriptomics data.☆10Oct 9, 2026Updated 3 weeks ago
- GLSL Shaders on OpenSeadragon zoomable tiles or any other image viaWebGL☆40Mar 13, 2023Updated 3 years ago