Template to help create a new QuPath extension
☆21Apr 23, 2026Updated last month
Alternatives and similar repositories for qupath-extension-template
Users that are interested in qupath-extension-template are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- Files associated with the From Samples To Knowledge 2025 QuPath training course☆16Feb 6, 2026Updated 4 months ago
- QuPath extension to run StarDist nucleus detection☆48Jul 2, 2025Updated 11 months ago
- Lab for quantitative bioimage analysis experiments in Python☆19Feb 16, 2026Updated 3 months ago
- QuPath extension for Segment Anything Model (SAM)☆136Feb 15, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Functional image processing☆17Oct 20, 2018Updated 7 years ago
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆23Apr 23, 2026Updated last month
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Dec 3, 2025Updated 6 months ago
- Graph-based framework to manipulate and analyze cell lineages from cell tracking data☆24Jun 3, 2026Updated last week
- ☆17May 16, 2024Updated 2 years ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- Docsify plugin to work with namespaces☆12Jun 7, 2021Updated 5 years ago
- Color Deconvolution for quantification of histological staining☆12Dec 18, 2018Updated 7 years ago
- Train Faster and Boost Performance with Class Hierarchies. Build Robust Representations Less Prone to Serious Classification Errors. - Py…☆10Jul 6, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Interprocess environment manager 🧊☆13May 11, 2026Updated last month
- A web-based system for learning pathology☆14Mar 5, 2026Updated 3 months ago
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 6 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆11May 3, 2023Updated 3 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 6 months ago
- ☆15May 18, 2026Updated 3 weeks ago
- A fully scalable robust image feature extraction library.☆28Updated this week
- Fractal backend☆20Updated this week
- ☆10Oct 2, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Oct 30, 2017Updated 8 years ago
- ☆225Feb 4, 2026Updated 4 months ago
- The official QuPath extension for InstanSeg☆29Jan 21, 2026Updated 4 months ago
- Trained models for use with QuPath☆16Aug 7, 2021Updated 4 years ago
- Reduce the size of existing CZI-documents by converting them to zstd-compressed CZI documents☆24Dec 17, 2025Updated 5 months ago
- python tools for BigDataViewer☆23Dec 29, 2024Updated last year
- GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…☆12Aug 24, 2023Updated 2 years ago
- ☆12Dec 6, 2024Updated last year
- Implementation of multiplex Leiden for analysis of spatial omics data☆21May 7, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- QuPath extension to interactively align images☆28Aug 7, 2025Updated 10 months ago
- Wrapper for the built-in Argparse, allowing missing command-line arguments to be filled in by the user via interactive prompts☆11Jun 19, 2020Updated 5 years ago
- 🚀 H2G-Net: Segmentation of breast cancer region from whole slide images☆29Jul 21, 2025Updated 10 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Aug 10, 2023Updated 2 years ago
- Segment Anything Model API☆113Feb 15, 2026Updated 3 months ago
- Deep learning-based multimodal integration of histology and genomics to improves cancer origin prediction☆28Mar 28, 2023Updated 3 years ago
- ☆18Nov 5, 2024Updated last year