Lazily load multiscale whole-slide images with openslide and dask
☆34Dec 6, 2022Updated 3 years ago
Alternatives and similar repositories for napari-lazy-openslide
Users that are interested in napari-lazy-openslide are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bio-Formats image file format to raw format converter☆103Updated this week
- A writer and reader for NGFF OME-Zarr datasets☆14Nov 2, 2021Updated 4 years ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 4 months ago
- ☆18Nov 25, 2025Updated 4 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- serve Zarr datasets via HTTP☆31Jun 12, 2023Updated 2 years ago
- ☆13Aug 16, 2024Updated last year
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 4 years ago
- A minimal Zarr image viewer based on Viv.☆188Updated this week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆28Mar 14, 2025Updated last year
- A napari plugin for zarr backed OME-NGFF images☆46Mar 17, 2026Updated last week
- multimodal whole slide image registration in a graph structure☆101Jul 4, 2024Updated last year
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 4 months ago
- Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆155Mar 16, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆14Jan 25, 2024Updated 2 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Toolkit to help develop and run QuPath scripts from Eclipse and other IDEs, including over remote connections. (See README.md for more in…☆17Aug 19, 2020Updated 5 years ago
- Quantitative Data Analysis for spectroscopic LEEM☆18Feb 17, 2022Updated 4 years ago
- An Ilastik-like interactive pixel classifier.☆16Sep 5, 2024Updated last year
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 6 months ago
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆229Updated this week
- Deploy Dask on Marathon☆10Feb 6, 2017Updated 9 years ago
- ☆19Mar 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Running ImJoy plugins in Jupyter notebooks☆11Jan 10, 2023Updated 3 years ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated last year
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 2 years ago
- 1d plotting in napari-based canvas.☆25Updated this week
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- QuPath extension for Segment Anything Model (SAM)☆132Feb 15, 2026Updated last month
- Browse your OMERO database from within napari.☆40Jan 15, 2026Updated 2 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 8 months ago
- Template for creating a new python repository☆13Sep 28, 2025Updated 6 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆48Updated this week
- Trained models for use with QuPath☆16Aug 7, 2021Updated 4 years ago
- Stitching of large tiled datasets☆22Feb 13, 2026Updated last month
- Fusing image tiles with dask array's map_blocks