A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
☆19Jul 21, 2026Updated this week
Alternatives and similar repositories for napari-stitcher
Users that are interested in napari-stitcher are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ilastik plugin for napari☆15Mar 2, 2026Updated 4 months ago
- A napari plugin to view and edit layer metadata☆13Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆56Nov 13, 2025Updated 8 months ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated 3 weeks ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Generate multifunctional and macro recordable GUIs from Python classes☆46Jun 23, 2026Updated last month
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 7 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Linking napari layers with Matplotlib plots☆45Jul 1, 2026Updated 3 weeks ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated 3 weeks ago
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated 3 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆63Updated this week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated last month
- A fully scalable robust image feature extraction library.☆29Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- GPU-accelerated Image Processing library for C++☆16Updated this week
- ☆13Apr 27, 2020Updated 6 years ago
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆124Updated this week
- Template for creating a new python repository☆13Sep 28, 2025Updated 9 months ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- ☆39May 29, 2026Updated last month
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- ☆26Jun 3, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- ☆23Oct 22, 2024Updated last year
- ☆15Jul 17, 2026Updated last week
- Conda Environment MAnager, a library to execute code in isolated environments.☆24Jul 2, 2026Updated 3 weeks ago
- A stable diffusion demo for napari☆11Jun 7, 2026Updated last month
- dask empowered fast4dreg☆17Mar 11, 2026Updated 4 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Jul 6, 2026Updated 2 weeks ago
- Speed up coding/extending image analysis in Python.☆37May 9, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Jun 16, 2026Updated last month
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 8 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆74Sep 29, 2024Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Yet Another Ome-ZARR Schema❗️☆23Jul 1, 2026Updated 3 weeks ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago