andreped / NoCodeSegLinks
🔬 Code-free deep segmentation for computational pathology
☆54Updated last year
Alternatives and similar repositories for NoCodeSeg
Users that are interested in NoCodeSeg are comparing it to the libraries listed below
Sorting:
- Re-stained whole slide image alignment☆34Updated last year
- An open-source digital pathology based rapid image annotation tool☆81Updated last week
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- ⚡ Open-source software for deep learning-based digital pathology☆133Updated last year
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆74Updated last year
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆104Updated 8 months ago
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated last month
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆72Updated 6 months ago
- Pipeline for computational pathology☆38Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last month
- QuPath extension for Segment Anything Model (SAM)☆114Updated last week
- A pipeline to segment tissue from the background in histological images☆70Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- The official deployment of the Digital Slide Archive and HistomicsTK.☆125Updated this week
- ☆62Updated 10 months ago
- GPU-accelerated stain normalization command line tool☆22Updated last year
- A Girder plugin for pathology image annotations and analysis.☆73Updated this week
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- ☆20Updated 2 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆68Updated 6 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆102Updated 6 months ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆23Updated 4 years ago
- ☆55Updated 3 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- ☆45Updated 2 years ago
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆36Updated 4 years ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆174Updated 3 years ago