Alternatives and similar repositories for ImageJ_Export-LIF-as-Individual-Images

Users that are interested in ImageJ_Export-LIF-as-Individual-Images are comparing it to the libraries listed below

• NEUBIAS / Defragmentation_TrainingSchool_EOSC-Life_2022
  "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…
  ☆15Updated 2 years ago
• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• BIOP / ijp-kheops
  ☆20Updated 2 months ago
• tpecot / DeepLearningForBiologists_FromClassificationToSegmentation
  ☆12Updated 6 months ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆17Updated last year
• peng-lab / leonardo_toolset
  ☆15Updated 2 weeks ago
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆33Updated 2 months ago
• haesleinhuepf / devbio-napari
  ☆51Updated 5 months ago
• imagej / imagej.github.io
  The ImageJ wiki
  ☆27Updated this week
• AiviaCommunity / PythonForAivia
  Python scripts library for Aivia. Ask your questions on the forum >>
  ☆15Updated last week
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆16Updated 5 months ago
• weigertlab / spotiflow
  Accurate and efficient spot detection for microscopy data
  ☆100Updated last week
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆86Updated 2 weeks ago
• stardist / stardist-imagej
  StarDist plugin for ImageJ
  ☆30Updated 3 years ago
• RMS-DAIM / Python-for-Bioimage-Analysis
  This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…
  ☆135Updated 5 years ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆16Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆29Updated 5 months ago
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆102Updated this week
• maweigert / spotipy
  ☆12Updated last year
• bauerdavid / napari-nD-annotator
  ☆37Updated last month
• nickdelgrosso / ABBA-QuPath-RegistrationAnalysis
  A visualization app for 3D-registered data processed in ABBA and QuPath
  ☆19Updated 2 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆84Updated last week
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆32Updated 4 years ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated 2 weeks ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆26Updated 4 years ago
• BIOP / ijl-utilities-wrappers
  Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
  ☆38Updated 4 months ago
• ahklemm / ImageJMacro_Introduction
  A first intoduction to scripting in Fiji using the ImageJ Macro language.
  ☆26Updated last year
• NEUBIAS / Defragmentation_TS2_EOSC-Life_2023
  "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…
  ☆10Updated 2 years ago
• BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022
  ☆15Updated 2 years ago
• baigouy / EPySeg
  ☆21Updated last year