Alternatives and similar repositories for ImageJ_Export-LIF-as-Individual-Images

Users that are interested in ImageJ_Export-LIF-as-Individual-Images are comparing it to the libraries listed below

• dlegland / mathematical_morphology_with_MorphoLibJ
  A collection of demonstration materials for MorphoLibJ.
  ☆12Updated 2 years ago
• haesleinhuepf / napari-segment-blobs-and-things-with-membranes
  A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…
  ☆30Updated 6 months ago
• stardist / stardist-imagej
  StarDist plugin for ImageJ
  ☆30Updated 3 years ago
• NEUBIAS / Defragmentation_TrainingSchool_EOSC-Life_2022
  "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…
  ☆15Updated 2 years ago
• BIOP / ijp-kheops
  ☆20Updated last month
• AiviaCommunity / PythonForAivia
  Python scripts library for Aivia. Ask your questions on the forum >>
  ☆14Updated 2 weeks ago
• BiAPoL / Quantitative_Bio_Image_Analysis_with_Python_2022
  This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.
  ☆16Updated 3 years ago
• haesleinhuepf / devbio-napari
  ☆51Updated 6 months ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆17Updated last year
• RMS-DAIM / Python-for-Bioimage-Analysis
  This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…
  ☆135Updated 5 years ago
• Kapoorlabs-CAPED / vollseg-napari
  Napari plugin for vollseg
  ☆15Updated 4 months ago
• peng-lab / leonardo_toolset
  ☆16Updated last month
• BIOP / ijl-utilities-wrappers
  Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
  ☆39Updated 2 weeks ago
• AllenCellModeling / napari-aicsimageio
  Multiple file format reading directly into napari using pure Python
  ☆39Updated last month
• BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022
  ☆16Updated 2 years ago
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆33Updated last month
• ahklemm / ImageJMacro_Introduction
  A first intoduction to scripting in Fiji using the ImageJ Macro language.
  ☆26Updated last year
• weigertlab / spotiflow
  Accurate and efficient spot detection for microscopy data
  ☆108Updated last month
• stegmaierj / Cellpose3D
  3D Extension of the Cellpose Algorithm by Stringer et al., 2021.
  ☆35Updated 3 years ago
• tpecot / DeepLearningForBiologists_FromClassificationToSegmentation
  ☆12Updated 7 months ago
• maweigert / spotipy
  ☆12Updated last year
• bioio-devs / bioio
  Image reading, metadata management, and image writing for Microscopy images in Python
  ☆105Updated last month
• nickdelgrosso / ABBA-QuPath-RegistrationAnalysis
  A visualization app for 3D-registered data processed in ABBA and QuPath
  ☆20Updated 3 years ago
• imagej / imagej.github.io
  The ImageJ wiki
  ☆29Updated this week
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆40Updated 6 months ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆26Updated 4 years ago
• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated 2 weeks ago
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆82Updated this week
• Gubra-ApS / LSFM-mouse-brain-atlas
  ☆18Updated 3 years ago
• guiwitz / napari-serialcellpose
  ☆15Updated 3 weeks ago