ImageJ / Fiji macro to automatically export Leica LIF file as individual images (batch mode available)
β11Feb 15, 2022Updated 4 years ago
Alternatives and similar repositories for ImageJ_Export-LIF-as-Individual-Images
Users that are interested in ImageJ_Export-LIF-as-Individual-Images are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π¬ Genotyping tool for genome-edited samples using nanopore-targeted sequencingβ14May 22, 2026Updated 2 months ago
- θΏζ―δΈη―δ»0εΌε§ηεε¦ζζ‘£γβ17Sep 18, 2023Updated 2 years ago
- The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration β¦β17Jun 20, 2023Updated 3 years ago
- β21Jul 30, 2024Updated last year
- β10Nov 29, 2024Updated last year
- Managed Database hosting by DigitalOcean β’ AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MiC is an ImageJ plugin to compare segmentation masksβ20Jul 16, 2026Updated last week
- A collection of tools for analyzing electrocorticography dataβ19Oct 6, 2017Updated 8 years ago
- Tools for handling FIB-SEM data and annotationsβ21Apr 4, 2025Updated last year
- GPU-accelerated image processing using CLIJ via pyimagej in pythonβ10Jan 8, 2021Updated 5 years ago
- Jupyter notebooks for CellProfiler and friendsβ14Mar 23, 2018Updated 8 years ago
- MSSR Pluginβ14Oct 30, 2024Updated last year
- β31Jan 19, 2026Updated 6 months ago
- Various tools & templates for manuscript preparation (Illustrator and InDesign)β16May 10, 2019Updated 7 years ago
- Detection of Molecules plugin for ImageJ: SMLM 2D/3D localizations, drift and chromatic aberration correction, etcβ15Nov 16, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python utility and library for converting Nikon .nd2 files to pyramidal OME TIFF.β13May 13, 2022Updated 4 years ago
- β38Jul 26, 2016Updated 10 years ago
- Lattice light-sheet post-processing utility.β30Jul 6, 2026Updated 2 weeks ago
- Image Deconvolution via Noise-Tolerant Self-Supervised Inversionβ30Sep 30, 2024Updated last year
- A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formatβ¦β14Jul 18, 2026Updated last week
- Python code to read/write .annotation files from Haloβ10Feb 19, 2025Updated last year
- a python module to download Broad Bioimage Benchmark Collection imagesβ24Mar 15, 2019Updated 7 years ago
- a free, open-source web app for annotating, training, and evaluating image understanding algorithmsβ25Nov 23, 2021Updated 4 years ago
- Image Cytometry Standard file reading and writing.β18Jan 5, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantificationβ23Sep 11, 2021Updated 4 years ago
- Segment Anything Model APIβ114Feb 15, 2026Updated 5 months ago
- Modular image and object analysis workflows for ImageJ/Fijiβ16Updated this week
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.β94Jul 6, 2026Updated 2 weeks ago
- π AutoTx πͺ - a smart background file transfer service for Windows.β28Jul 8, 2026Updated 2 weeks ago
- Exercises and data sets for the Tidyverse for Beginners workshopβ21Aug 22, 2018Updated 7 years ago
- The Detectron 2 MaskRCNN implementation for the PanNuke Dataset (https://jgamper.github.io/PanNukeDataset/).β14Jun 25, 2021Updated 5 years ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.β96Mar 24, 2026Updated 4 months ago
- Create analysis reports from inForm data.β16Nov 9, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- FOSS Resources for Spectroscopyβ21Nov 25, 2025Updated 8 months ago
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in cβ¦β17Sep 26, 2021Updated 4 years ago
- A proof of concept to run python segmentations and recovering the results within QuPathβ19Feb 13, 2021Updated 5 years ago
- Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.β32May 27, 2025Updated last year
- An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, aβ¦β21Updated this week
- Create web-based OME-Zarr galleries