choosehappy / QuickAnnotatorLinks
An open-source digital pathology based rapid image annotation tool
☆77Updated 3 weeks ago
Alternatives and similar repositories for QuickAnnotator
Users that are interested in QuickAnnotator are comparing it to the libraries listed below
Sorting:
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 11 months ago
- Coincides with blogpost for using geojson and shapely☆32Updated 4 years ago
- A Girder plugin for pathology image annotations and analysis.☆70Updated last week
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆33Updated last year
- Pipeline for computational pathology☆35Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆121Updated this week
- A tool for rapidly labeling objects using deep learning feature embedding☆32Updated 9 months ago
- Re-stained whole slide image alignment☆33Updated last year
- A Python library for deep learning on whole-slide images☆53Updated 3 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 2 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆102Updated 6 months ago
- GrandQC tool for tissue detection and quality control in pathology☆47Updated 2 months ago
- ⚡ Open-source software for deep learning-based digital pathology☆134Updated 11 months ago
- QuPath extension for Segment Anything Model (SAM)☆108Updated 2 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last month
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 4 years ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆31Updated last year
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆70Updated 10 months ago
- Python 3 library for the augmentation & normalization of H&E images☆56Updated 2 years ago
- Full package for applying deep learning to virtual slides.☆68Updated 6 years ago
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago
- Histopathology Image Analysis☆92Updated last year
- ☆33Updated 2 months ago
- Virtual Alignment of pathoLogy Image Series☆157Updated 5 months ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated last week
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆54Updated last year
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆54Updated last year
- Deep Learning-based Frozen Section to FFPE Translation☆56Updated 7 months ago
- A pipeline to segment tissue from the background in histological images☆69Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago