An open-source digital pathology based rapid image annotation tool
☆90Apr 10, 2026Updated this week
Alternatives and similar repositories for QuickAnnotator
Users that are interested in QuickAnnotator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Intelligent data partitioning using quality control metrics☆18Jun 10, 2025Updated 10 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆34Apr 7, 2026Updated last week
- A tool for training machine-learning models with whole-slide imaging datasets☆26Dec 27, 2023Updated 2 years ago
- ☆16Nov 3, 2023Updated 2 years ago
- Coincides with blogpost for using geojson and shapely☆33Nov 16, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Girder plugin for pathology image annotations and analysis.☆79Mar 30, 2026Updated 2 weeks ago
- ⚡ Open-source software for deep learning-based digital pathology☆141Jun 14, 2024Updated last year
- Pieces of code likely to be useful as part of larger projects☆21Feb 24, 2026Updated last month
- ☆71Sep 23, 2024Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆135Apr 7, 2026Updated last week
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆79Jan 9, 2023Updated 3 years ago
- 🔬 Code-free deep segmentation for computational pathology☆56Jun 14, 2024Updated last year
- HistoQC is an open-source quality control tool for digital pathology slides☆322Dec 10, 2025Updated 4 months ago
- Interactive Segmentation of Nucleus☆67Nov 22, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆268Dec 23, 2023Updated 2 years ago
- ☆20Dec 20, 2022Updated 3 years ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆28Dec 3, 2025Updated 4 months ago
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆56Jun 20, 2023Updated 2 years ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆66Sep 12, 2022Updated 3 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Dec 5, 2025Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆20Updated this week
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- Robust quad-tree based registration on whole slide images☆20Apr 2, 2025Updated last year
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 2 months ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆177Apr 1, 2022Updated 4 years ago
- Dense Steerable Filter CNN☆76Nov 21, 2022Updated 3 years ago
- An implementation of Unet for pytorch designed for digital pathology segmentation☆127Aug 23, 2022Updated 3 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆38Feb 6, 2026Updated 2 months ago
- ☆13Aug 30, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Python toolkit for pathology image analysis algorithms.☆470Apr 6, 2026Updated last week
- An OpenSeadragon plugin that adds canvas overlay capability☆24Apr 23, 2019Updated 6 years ago
- QuPath extension for Segment Anything Model (SAM)☆132Feb 15, 2026Updated last month
- Tools for computational pathology☆447Apr 1, 2026Updated last week
- PAthological QUpath Obsession - QuPath and Python conversations☆133Mar 14, 2026Updated last month
- Program for the analysis and visualization of whole-slide images in digital pathology☆670Sep 12, 2023Updated 2 years ago
- WSICS☆30Apr 19, 2019Updated 6 years ago