ilastik / ilastik-napariLinks
ilastik plugin for napari
☆14Updated last year
Alternatives and similar repositories for ilastik-napari
Users that are interested in ilastik-napari are comparing it to the libraries listed below
Sorting:
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last week
- Visualizing feature measurements on label images in napari☆10Updated 11 months ago
- ☆23Updated 2 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆23Updated 4 months ago
- ☆24Updated 2 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated 2 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 2 months ago
- Speed up coding/extending image analysis in Python.☆33Updated last month
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆16Updated 3 months ago
- napari plugin for iteratively improving 3D instance segmentation of cells (u-net x watershed)☆9Updated last year
- Process images using SimpleITK in napari☆21Updated 2 months ago
- A 3D interactivity toolbox for napari☆37Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 4 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 7 months ago
- MultiModal Big Image Data Sharing and Exploration☆15Updated 2 years ago
- ☆28Updated 2 months ago
- dask empowered fast4dreg☆11Updated 7 months ago
- python tools for BigDataViewer☆22Updated 6 months ago
- ☆16Updated 2 years ago
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- StarDist plugin for napari☆38Updated 10 months ago
- ☆11Updated 3 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆16Updated this week
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 7 months ago