svi-opensource / libicsLinks
Image Cytometry Standard file reading and writing.
☆18Updated last month
Alternatives and similar repositories for libics
Users that are interested in libics are comparing it to the libraries listed below
Sorting:
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Easily read and write ome-tiff images in python☆28Updated last year
- High quality visualization for volumetric image data☆52Updated this week
- ☆23Updated 4 years ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- ☆23Updated 2 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 7 months ago
- native Python dataclasses for the OME data model☆64Updated 3 weeks ago
- A multi-dimensional spatial image data structure for scientific Python.☆43Updated 3 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- ☆38Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated last week
- An Ilastik-like interactive pixel classifier.☆16Updated last year
- Pure Python library for reading NIS Elements ND2 images and metadata☆47Updated 10 months ago
- ☆39Updated this week
- Accelerated Pixel and Object Classifiers (APOC)☆57Updated 4 months ago
- Python image segmentation plugin☆31Updated 4 years ago
- A python script editor plugin for napari☆11Updated 2 years ago
- Tool for segmentation in bioimaging☆34Updated this week
- Whole slide image registration through wsireg in napari.☆12Updated 2 years ago
- ☆13Updated 5 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆64Updated 8 months ago
- ☆36Updated last year
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆86Updated 3 weeks ago
- Command-line client for Fractal☆47Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- A napari plugin for zarr backed OME-NGFF images☆42Updated 2 weeks ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 8 months ago
- Image registration (alignment) software for large microscopy images☆26Updated 2 years ago
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆58Updated last month