Alternatives and similar repositories for libics

Users that are interested in libics are comparing it to the libraries listed below

• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• allen-cell-animated / agave
  ☆49Updated last week
• ZEISS / libczi
  libCZI is an Open Source Cross-Platform C++ library to read and write CZI.
  ☆56Updated last week
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆27Updated last year
• bigdataprocessor / bigdataprocessor2
  ☆22Updated 2 weeks ago
• imaris / ImarisWriter
  ☆38Updated last year
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• guiwitz / napari_demo
  ☆22Updated 4 years ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 11 months ago
• mobie / mobie-viewer-fiji
  ☆37Updated last week
• VolkerH / DaskFusion
  Fusing image tiles with dask array's map_blocks
  ☆30Updated last year
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 11 months ago
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• marrlab / BaSiC
  A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images
  ☆61Updated 5 months ago
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated 5 months ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆35Updated last year
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated last week
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆66Updated last week
• cgohlke / oiffile
  Read Olympus image files (OIF and OIB).
  ☆13Updated 3 months ago
• SCIInstitute / fluorender
  FluoRender is an interactive tool for fluorescence microscopy data visualization and analysis
  ☆45Updated this week
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated last week
• Open-Science-Tools / nd2reader
  Pure Python library for reading NIS Elements ND2 images and metadata
  ☆47Updated 6 months ago
• haesleinhuepf / the-segmentation-game
  Gamified image segmentation quality estimation
  ☆17Updated 3 months ago
• hanjinliu / napari-filaments
  A napari plugin for filament analysis
  ☆9Updated last year
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated 2 years ago
• spatial-image / spatial-image
  A multi-dimensional spatial image data structure for scientific Python.
  ☆40Updated last week
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆58Updated last week
• MicroscopeAutoPilot / autopilot
  AutoPilot library
  ☆14Updated 8 years ago
• sofroniewn / image-demos
  imaging demos
  ☆9Updated 2 years ago