svi-opensource / libicsLinks
Image Cytometry Standard file reading and writing.
☆18Updated last month
Alternatives and similar repositories for libics
Users that are interested in libics are comparing it to the libraries listed below
Sorting:
- High quality visualization for volumetric image data☆54Updated 2 weeks ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- Easily read and write ome-tiff images in python☆28Updated last year
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆61Updated 3 weeks ago
- ☆38Updated last year
- ☆24Updated 3 months ago
- ☆23Updated 4 years ago
- native Python dataclasses for the OME data model☆65Updated 2 weeks ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- An Ilastik-like interactive pixel classifier.☆16Updated last year
- PSFj - Know your microscope fluorescence☆23Updated 5 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆64Updated 9 months ago
- GPU accelerated 3D image deconvolution using CUDA☆39Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆30Updated 8 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated 3 weeks ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- A napari plugin for zarr backed OME-NGFF images☆42Updated 2 weeks ago
- ☆41Updated last week
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆19Updated last month
- A multi-dimensional spatial image data structure for scientific Python.☆43Updated 4 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 8 months ago
- ☆36Updated last year
- Tool for segmentation in bioimaging☆35Updated last week
- A general illumination correction method for optical microscopy.☆42Updated 4 years ago
- AutoPilot library☆15Updated 9 years ago
- mcib3d core library for 3D ImageJ suite☆15Updated 3 years ago
- Python module for registering and fusing multi-view microscopy data☆24Updated 9 months ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆48Updated 11 months ago
- Create 3D/4D animations using a natural language-based syntax☆61Updated 6 months ago
- Yet Another Pixel Classifier (based on deep learning)☆36Updated last year