svi-opensource / libicsLinks
Image Cytometry Standard file reading and writing.
☆18Updated last month
Alternatives and similar repositories for libics
Users that are interested in libics are comparing it to the libraries listed below
Sorting:
- ☆51Updated this week
- Easily read and write ome-tiff images in python☆27Updated last year
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Updated 4 years ago
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆58Updated this week
- ☆38Updated last year
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- ☆23Updated 3 weeks ago
- Python module for registering and fusing multi-view microscopy data☆23Updated 7 months ago
- native Python dataclasses for the OME data model☆61Updated last week
- A multi-dimensional spatial image data structure for scientific Python.☆43Updated 2 months ago
- ☆22Updated 4 years ago
- An Ilastik-like interactive pixel classifier.☆16Updated last year
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- ☆13Updated 5 years ago
- ☆39Updated last week
- mcib3d core library for 3D ImageJ suite☆15Updated 3 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆62Updated 6 months ago
- GPU accelerated 3D image deconvolution using CUDA☆37Updated last year
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆21Updated 2 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 6 months ago
- Tool for segmentation in bioimaging☆35Updated this week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated 2 months ago
- ☆35Updated last year
- A napari plugin for itk-elastix☆39Updated 2 weeks ago
- Command-line client for Fractal☆47Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 2 months ago
- A napari plugin for zarr backed OME-NGFF images☆37Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- Pure Python library for reading NIS Elements ND2 images and metadata☆47Updated 8 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year