Alternatives and similar repositories for libics

Users that are interested in libics are comparing it to the libraries listed below

• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆55Updated this week
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 4 years ago
• bigdataprocessor / bigdataprocessor2
  ☆24Updated 4 months ago
• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆28Updated last year
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 4 years ago
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆65Updated 3 weeks ago
• guiwitz / napari_demo
  ☆23Updated 4 years ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• imaris / ImarisWriter
  ☆38Updated last year
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆43Updated 2 weeks ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆49Updated this week
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated last year
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 10 months ago
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated 2 years ago
• VolkerH / DaskFusion
  Fusing image tiles with dask array's map_blocks
  ☆31Updated last year
• spatial-image / spatial-image
  A multi-dimensional spatial image data structure for scientific Python.
  ☆44Updated 5 months ago
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆55Updated 2 months ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆23Updated 5 years ago
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆48Updated last week
• imjoy-team / kaibu
  Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.
  ☆35Updated 10 months ago
• cgohlke / oiffile
  Read Olympus image files (OIF and OIB).
  ☆13Updated 3 weeks ago
• mcib3d / mcib3d-core
  mcib3d core library for 3D ImageJ suite
  ☆15Updated 3 years ago
• InsightSoftwareConsortium / ITKIOOMEZarrNGFF
  ITK IO for images stored in OME-Zarr format.
  ☆11Updated 5 months ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 6 months ago
• glencoesoftware / NGFF-Converter
  NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF
  ☆35Updated 2 months ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆39Updated last year
• ZEISS / libczi
  libCZI is an Open Source Cross-Platform C++ library to read and write CZI.
  ☆62Updated last week
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆25Updated 10 months ago