AstraZeneca / napari-wsiView external linksLinks
A plugin to read whole slide images within napari.
☆21Nov 24, 2025Updated 2 months ago
Alternatives and similar repositories for napari-wsi
Users that are interested in napari-wsi are comparing it to the libraries listed below
Sorting:
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated last year
- ilastik plugin for napari☆14Dec 15, 2025Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated 10 months ago
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- A napari plugin to view and edit metadata☆13Feb 1, 2026Updated last week
- ☆36Mar 22, 2024Updated last year
- ☆13Apr 27, 2020Updated 5 years ago
- ☆14Jan 25, 2024Updated 2 years ago
- ☆13Mar 10, 2020Updated 5 years ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated 5 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆27Feb 17, 2025Updated 11 months ago
- GPU accelerated 3D image deconvolution using CUDA☆39Jul 18, 2024Updated last year
- Linking napari layers with Matplotlib plots☆43Feb 2, 2026Updated last week
- ☆15Jul 29, 2022Updated 3 years ago
- An Ilastik-like interactive pixel classifier.☆16Sep 5, 2024Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45May 1, 2025Updated 9 months ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 2 months ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 3 weeks ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 3 months ago
- python tools for BigDataViewer☆22Dec 29, 2024Updated last year
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated last week
- ☆20Feb 5, 2026Updated last week
- Tool for segmentation in bioimaging☆35Updated this week
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 3 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Apr 1, 2025Updated 10 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 4 years ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Nov 16, 2025Updated 2 months ago
- Lectures, labs and all documents associated with 3D Morphometrics workshop at FHL (Summer 2019)☆14Feb 6, 2020Updated 6 years ago
- Distributed segmentation for bio-image-analysis☆41Jan 18, 2026Updated 3 weeks ago
- General-purpouse camera capture plugin for data streaming to napari☆26Mar 18, 2024Updated last year
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆28Feb 5, 2026Updated last week
- A fully scalable robust image feature extraction library.☆28Updated this week
- ☆23Mar 26, 2021Updated 4 years ago