AstraZeneca / napari-wsi
A plugin to read whole slide images within napari.
☆16Updated this week
Alternatives and similar repositories for napari-wsi:
Users that are interested in napari-wsi are comparing it to the libraries listed below
- ☆10Updated 6 months ago
- Visualizing feature measurements on label images in napari☆10Updated 6 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆12Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated this week
- A napari plugin for zarr backed OME-NGFF images☆32Updated this week
- A napari plugin to view and edit metadata☆10Updated last year
- ☆13Updated 4 years ago
- Process and analyze surfaces using vedo in napari.☆24Updated 9 months ago
- A 3D interactivity toolbox for napari☆32Updated 2 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 2 months ago
- A minimal Python package for reading OME-Zarr (meta)data☆17Updated this week
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆13Updated last year
- ☆15Updated 2 years ago
- Optimize image processing workflows in napari☆17Updated 2 years ago
- ☆22Updated 5 months ago
- ☆16Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 4 months ago
- Python libraries for loading, running and packaging bioimage.io models☆29Updated this week
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- Repository for teaching and instruction purposes☆9Updated 2 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated last week
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated 5 months ago
- ☆20Updated last year
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Course on Deep Learning for imaging using PyTorch☆13Updated 3 years ago
- ☆12Updated 4 years ago
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆28Updated 3 weeks ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 weeks ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year