Alternatives and similar repositories for qupath-extension-wsinfer

Users that are interested in qupath-extension-wsinfer are comparing it to the libraries listed below

• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆126Updated 4 months ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆102Updated 3 weeks ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆76Updated 9 months ago
• huangzhii / IMPRESS
  ☆20Updated 3 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆89Updated last week
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆37Updated last year
• tpecot / WholeSlideImageAnalysisWithQuPath
  ☆30Updated last month
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆128Updated 3 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆36Updated 2 years ago
• impromptuRong / hd_wsi
  ☆37Updated 9 months ago
• computational-cell-analytics / patho-sam
  Segment Anything for Histopathology
  ☆55Updated 2 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• qupath / qupath-extension-stardist
  QuPath extension to run StarDist nucleus detection
  ☆48Updated 5 months ago
• kmboehm / orpheus
  ☆15Updated 10 months ago
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆36Updated last year
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 4 years ago
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆34Updated 3 months ago
• cpath-ukk / lung_cancer
  ☆17Updated 10 months ago
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆198Updated 6 months ago
• AdalbertoCq / Histomorphological-Phenotype-Learning
  Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…
  ☆79Updated 10 months ago
• labsyspharm / orion-crc
  ☆22Updated 6 months ago
• labsyspharm / palom
  Piecewise alignment for layers of mosaics
  ☆29Updated 3 months ago
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆29Updated last year
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 5 years ago
• vanvalenlab / cellSAM
  Codebase for "A Foundation Model for Cell Segmentation"
  ☆152Updated last month
• instanseg / instanseg
  ☆203Updated last week
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆97Updated last year
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆62Updated 3 years ago