qupath / qupath-extension-wsinferLinks
QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
☆25Updated 3 months ago
Alternatives and similar repositories for qupath-extension-wsinfer
Users that are interested in qupath-extension-wsinfer are comparing it to the libraries listed below
Sorting:
- QuPath extension for Segment Anything Model (SAM)☆120Updated 2 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆80Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆65Updated 7 months ago
- ☆20Updated 2 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last week
- Pipeline for computational pathology☆38Updated last year
- ☆36Updated 6 months ago
- Solid Tumor Associative Modeling in Pathology☆86Updated this week
- An open-source digital pathology based rapid image annotation tool☆86Updated 2 weeks ago
- 🔬 Code-free deep segmentation for computational pathology☆56Updated last year
- A tool for rapidly labeling objects using deep learning feature embedding☆33Updated last month
- Re-stained whole slide image alignment☆35Updated last year
- ☆27Updated 4 months ago
- ☆16Updated 8 months ago
- ☆15Updated 7 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆71Updated 8 months ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆36Updated last year
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- A Python library for deep learning on whole-slide images☆54Updated 3 years ago
- QuPath extension to run StarDist nucleus detection☆46Updated 3 months ago
- PAthological QUpath Obsession - QuPath and Python conversations☆122Updated last month
- Python 3 library for the augmentation & normalization of H&E images☆61Updated 3 years ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆106Updated 8 months ago
- Segment Anything for Histopathology☆46Updated last month
- Tools to build deep learning pipelines.☆109Updated 10 months ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- Virtual Alignment of pathoLogy Image Series☆178Updated 3 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆106Updated 10 months ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆36Updated 7 months ago
- Awesome List of Digital and Computational Pathology Resources☆77Updated 8 months ago