QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
☆28Dec 3, 2025Updated 3 months ago
Alternatives and similar repositories for qupath-extension-wsinfer
Users that are interested in qupath-extension-wsinfer are comparing it to the libraries listed below
Sorting:
- QuPath extension to run StarDist nucleus detection☆48Jul 2, 2025Updated 8 months ago
- QuPath extension to interactively align images☆26Aug 7, 2025Updated 6 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆85Jul 11, 2024Updated last year
- an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.☆89Feb 5, 2026Updated last month
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 4 years ago
- Trained models for use with QuPath☆16Aug 7, 2021Updated 4 years ago
- QuPath extension for Segment Anything Model (SAM)☆129Feb 15, 2026Updated 2 weeks ago
- PAthological QUpath Obsession - QuPath and Python conversations☆134Aug 29, 2025Updated 6 months ago
- 🚀 H2G-Net: Segmentation of breast cancer region from whole slide images☆28Jul 21, 2025Updated 7 months ago
- Lab for quantitative bioimage analysis experiments in Python☆19Feb 16, 2026Updated 2 weeks ago
- Template to help create a new QuPath extension☆21Aug 12, 2025Updated 6 months ago
- List of QuPath scripts for alignment and stain deconvolution of whole-slide histology images☆27Dec 5, 2022Updated 3 years ago
- The official QuPath extension for InstanSeg☆29Jan 21, 2026Updated last month
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆64Mar 14, 2024Updated last year
- Solid Tumor Associative Modeling in Pathology☆114Updated this week
- Python tool for stitching histopathology tissue fragments into artificial whole-mounts.☆23Dec 5, 2025Updated 3 months ago
- MESCnn: MESC classification by neural network☆10Jan 8, 2024Updated 2 years ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆16Jan 5, 2024Updated 2 years ago
- ImgLib2 RealTransform brought to QuPath☆29Oct 1, 2025Updated 5 months ago
- Segment Anything Model API☆109Feb 15, 2026Updated 2 weeks ago
- ☆24Jun 6, 2023Updated 2 years ago
- QuPath TIL classifier for Melanoma on HE slides☆10Jul 24, 2019Updated 6 years ago
- QuPath extension to work with images through OMERO's web API☆10Feb 10, 2026Updated 3 weeks ago
- ☆12Oct 21, 2023Updated 2 years ago
- Histopathology Feature Extractors (2024)☆13Jun 14, 2024Updated last year
- ⚡ Open-source software for deep learning-based digital pathology☆141Jun 14, 2024Updated last year
- An open-source digital pathology based rapid image annotation tool☆90Feb 26, 2026Updated last week
- Open source whole slide image preparation and viewing pipeline☆13Mar 16, 2020Updated 5 years ago
- An open-source, web-based viewer for zoomable images, implemented in pure JavaScript.☆14Apr 14, 2025Updated 10 months ago
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆22Oct 1, 2025Updated 5 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆27Feb 23, 2024Updated 2 years ago
- [ECCV 2024] Official Implementation of 《WSI-VQA: Interpreting Whole Slide Image by Generative Question Answering》☆61Dec 18, 2024Updated last year
- KimiaPath24: Dataset for retrieval and classification in digital pathology☆13Jun 4, 2017Updated 8 years ago
- Official code for "Improving Self-supervised Learning with Hardness-aware Dynamic Curriculum Learning: An Application to Digital Patholog…☆17Oct 15, 2021Updated 4 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆13Apr 8, 2023Updated 2 years ago
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆37Apr 29, 2024Updated last year
- 🔬 Code-free deep segmentation for computational pathology☆56Jun 14, 2024Updated last year
- [CVPR 2024] Self-Supervised Vision Mamba for Histopathology Images☆59Jul 23, 2025Updated 7 months ago
- GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…☆12Aug 24, 2023Updated 2 years ago