Alternatives and similar repositories for svs-deidentifier

Users that are interested in svs-deidentifier are comparing it to the libraries listed below

• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆25Updated 3 months ago
• impromptuRong / hd_wsi
  ☆36Updated 6 months ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆80Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆106Updated 10 months ago
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆121Updated 2 months ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆35Updated last year
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆36Updated 7 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆81Updated last year
• huangzhii / IMPRESS
  ☆20Updated 2 years ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆65Updated 7 months ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆86Updated last week
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆178Updated 3 months ago
• choosehappy / QuPathGeoJSONImportExport
  Coincides with blogpost for using geojson and shapely
  ☆33Updated 4 years ago
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆152Updated 8 months ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆29Updated last year
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆122Updated last month
• bgilbert / anonymize-slide
  Delete the label from a whole-slide image
  ☆65Updated 4 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆56Updated last year
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆69Updated 2 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated 2 weeks ago
• qinghezeng / Histo2GeneSignatures
  Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images
  ☆20Updated last year
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆33Updated last month
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆61Updated 3 years ago
• DigitalSlideArchive / HistomicsUI
  A Girder plugin for pathology image annotations and analysis.
  ☆74Updated this week
• manuel-munoz-aguirre / PyHIST
  A pipeline to segment tissue from the background in histological images
  ☆70Updated 2 years ago
• open-pathology / awesome-pathology
  Awesome List of Digital and Computational Pathology Resources
  ☆79Updated 8 months ago