pearcetm / svs-deidentifier
Strip potentially identifying label and macro images from Aperio SVS whole slide image files
☆31Updated last year
Alternatives and similar repositories for svs-deidentifier
Users that are interested in svs-deidentifier are comparing it to the libraries listed below
Sorting:
- Pipeline for computational pathology☆35Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated last month
- ☆32Updated last month
- Re-stained whole slide image alignment☆33Updated last year
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last month
- ☆21Updated 2 years ago
- GrandQC tool for tissue detection and quality control in pathology☆46Updated 2 months ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 11 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆28Updated last year
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆35Updated 3 months ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆32Updated last year
- Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning☆28Updated 4 years ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆68Updated last year
- Delete the label from a whole-slide image☆64Updated 4 years ago
- ☆59Updated 7 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆69Updated 10 months ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆67Updated 2 years ago
- Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…☆52Updated 5 months ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆100Updated 5 months ago
- A tool for rapidly labeling objects using deep learning feature embedding☆32Updated 8 months ago
- Artificial Intelligence predicts immune and inflammatory gene signatures directly from hepatocellular carcinoma histology images☆19Updated 10 months ago
- Interpretable Gland-Graph Networks☆21Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆54Updated 2 years ago
- Solid Tumor Associative Modeling in Pathology☆74Updated this week
- An open-source digital pathology based rapid image annotation tool☆77Updated last week
- PAthological QUpath Obsession - QuPath and Python conversations☆115Updated 4 months ago
- ☆55Updated 3 years ago
- Histopathology Image Analysis☆92Updated last year
- ☆14Updated 2 months ago
- ☆40Updated 3 years ago