MIAnalyzer / MIALinks
Microsopic Image Analyzer (MIA)
☆28Updated last month
Alternatives and similar repositories for MIA
Users that are interested in MIA are comparing it to the libraries listed below
Sorting:
- The official QuPath extension for InstanSeg☆25Updated 3 weeks ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- QuPath extension for Cellsparse☆19Updated 4 months ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated 2 weeks ago
- StarDist plugin for napari☆39Updated last year
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- Image registration (alignment) software for large microscopy images☆25Updated last year
- SplineDist: Automated Cell Segmentation with Spline Curves☆68Updated 11 months ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 3 weeks ago
- Lab for quantitative bioimage analysis experiments in Python☆15Updated 7 months ago
- MethodsJ2☆14Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated last month
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 4 months ago
- Whole slide image registration through wsireg in napari.☆12Updated 2 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 10 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 9 months ago
- Raw format to OME-TIFF converter☆55Updated last week
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated last month
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated 11 months ago
- ☆24Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- Piecewise alignment for layers of mosaics☆29Updated 2 weeks ago
- ☆27Updated 4 months ago
- Development of PICASSO plugin for napari☆16Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week