MIAnalyzer / MIA
Microsopic Image Analyzer (MIA)
☆29Updated 11 months ago
Alternatives and similar repositories for MIA:
Users that are interested in MIA are comparing it to the libraries listed below
- QuPath extension for Cellsparse☆18Updated 3 months ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- Image registration (alignment) software for large microscopy images☆23Updated last year
- The official QuPath extension for InstanSeg☆14Updated 2 weeks ago
- Guides and code for 3D nuclear instance segmentation☆20Updated 2 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- ☆25Updated last month
- Development of PICASSO plugin for napari☆14Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 3 months ago
- A platform for compiling, analyzing, and exploring tracking data☆43Updated this week
- Visualizing feature measurements on label images in napari☆10Updated 7 months ago
- StarDist plugin for napari☆37Updated 6 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 4 months ago
- Whole slide image registration through wsireg in napari.☆13Updated last year
- MethodsJ2☆14Updated 2 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 3 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 4 months ago
- Piecewise alignment for layers of mosaics☆23Updated 2 months ago
- ☆21Updated last year
- QuPath extension to interactively align images☆22Updated 3 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 5 months ago
- ☆20Updated 11 months ago
- Transfer trained StarDist models across imaging modalities☆3Updated 5 months ago
- ☆30Updated last year
- MiC is an ImageJ plugin to compare segmentation masks☆17Updated 8 months ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆28Updated last month
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year