guiwitz / napari-annotation-project
A minimalistic napari plugin to create and save regions of interest and annotations on series of images
☆13Updated last year
Alternatives and similar repositories for napari-annotation-project:
Users that are interested in napari-annotation-project are comparing it to the libraries listed below
- ☆17Updated 2 years ago
- Visualizing feature measurements on label images in napari☆10Updated 8 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated 2 weeks ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Process and analyze surfaces using vedo in napari.☆23Updated 10 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated 6 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 4 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 4 months ago
- Use Napari Viewer to display CZI images☆11Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆13Updated 2 weeks ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- A napari plugin to view and edit metadata☆10Updated last year
- ☆21Updated last year
- ☆13Updated 4 years ago
- ☆11Updated last week
- NGIO is a Python library to streamline OME-Zarr image analysis workflows.☆12Updated this week
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated 3 weeks ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- Optimize image processing workflows in napari☆17Updated 2 years ago
- ☆10Updated this week
- python tools for BigDataViewer☆22Updated 2 months ago
- ☆15Updated 2 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated 2 weeks ago
- ☆16Updated 2 years ago
- ☆23Updated 6 months ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated 2 weeks ago
- ilastik plugin for napari☆14Updated 11 months ago
- my first baby steps with Napari☆10Updated 5 years ago
- Create movies from series of key-frames in napari.☆37Updated 3 years ago