kauralasoo / wiggleplotrLinks
A small R package to make sequencing read coverage plots in R.
☆39Updated 3 years ago
Alternatives and similar repositories for wiggleplotr
Users that are interested in wiggleplotr are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Genomic plot in trellis layout☆40Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 3 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 11 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Glimma R package☆50Updated 10 months ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants☆11Updated 5 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- R package wrapping bedtools☆41Updated 3 months ago
- A tidy interface for coverage analysis☆30Updated 5 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Make rapid visualizations of RNA-seq data in R☆19Updated 6 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- a set of NGS pipelines☆24Updated last week
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 2 years ago
- HOT regions paper☆11Updated 6 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated last month
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- An R for fast and flexible DNA methylation analysis☆31Updated last week
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 6 months ago
- Tools for visualizing genomics data☆69Updated 3 years ago