kauralasoo / wiggleplotrLinks
A small R package to make sequencing read coverage plots in R.
☆39Updated last week
Alternatives and similar repositories for wiggleplotr
Users that are interested in wiggleplotr are comparing it to the libraries listed below
Sorting:
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Genomic plot in trellis layout☆41Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆30Updated last year
- Differential expression and allelic analysis, nonparametric statistics☆30Updated 10 months ago
- Transcript quantification import with automatic metadata detection☆67Updated last month
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 7 months ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Flexible Bayesian inference of mutational signatures☆37Updated 2 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆40Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- An R for fast and flexible DNA methylation analysis☆34Updated last month
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Fluff is a Python package that contains several scripts to produce pretty, publication-quality figures for next-generation sequencing exp…☆71Updated last year
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated last year
- a set of NGS pipelines☆24Updated 3 weeks ago
- Glimma R package☆50Updated last year
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 6 months ago
- Make rapid visualizations of RNA-seq data in R☆19Updated last month
- DRAGEN Tumor/Normal workflow post-processing☆23Updated 2 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 10 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year