kauralasoo / wiggleplotrLinks
A small R package to make sequencing read coverage plots in R.
☆38Updated 2 years ago
Alternatives and similar repositories for wiggleplotr
Users that are interested in wiggleplotr are comparing it to the libraries listed below
Sorting:
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 2 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Updated 8 years ago
- Genomic plot in trellis layout☆40Updated last year
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- A tidy interface for coverage analysis☆24Updated 5 years ago
- Flexible Bayesian inference of mutational signatures☆34Updated 2 years ago
- R package wrapping bedtools☆41Updated 2 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- ☆29Updated 10 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- a set of NGS pipelines☆24Updated last week
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Updated 5 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆22Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- ☆21Updated 9 months ago
- RNA-seq workflow: differential transcript usage☆21Updated last year
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆15Updated 4 years ago
- Genomic Association Tester☆31Updated 2 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants☆10Updated 5 years ago