StatGenPRD / STOPGAPLinks
Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varying disease areas and supporting information. The integrated dataset is also included.
☆11Updated 5 years ago
Alternatives and similar repositories for STOPGAP
Users that are interested in STOPGAP are comparing it to the libraries listed below
Sorting:
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- ☆11Updated 6 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 3 weeks ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- home of the bear's lair☆10Updated 8 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 8 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆18Updated 7 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated last month
- Examples using R and 1000 genomes data☆28Updated 4 years ago
- Machine learning use cases for teaching☆13Updated 8 years ago
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19Updated 5 years ago
- Gene network analysis☆19Updated 2 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 months ago
- Single sample network reconstruction in R☆22Updated 5 years ago
- ☆14Updated 2 years ago
- Source code for ScanGEO Shiny App☆15Updated 3 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆14Updated 7 years ago
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 5 years ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆14Updated 2 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆21Updated 3 weeks ago
- TOP results by CONfident efFECT Sizes.☆14Updated 7 months ago