Toolkit for QTL mapping and meta-analysis.
☆17May 24, 2022Updated 4 years ago
Alternatives and similar repositories for apex
Users that are interested in apex are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Jun 30, 2026Updated 2 months ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- An R package for creating mirrored Manhattan plots☆19Sep 30, 2022Updated 3 years ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- ☆10Jun 19, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- R package for "sum of single effects" regression.☆267Updated this week
- ☆24Aug 6, 2021Updated 5 years ago
- An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants☆14Oct 24, 2019Updated 6 years ago
- Ultrafast GPU-enabled QTL mapper☆218Jun 29, 2025Updated last year
- Gene expression in neuroexpresso database☆18Oct 25, 2024Updated last year
- ☆40Jan 20, 2021Updated 5 years ago
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 5 months ago
- Scripts and samples for using Grid Engine on Google Cloud Platform.☆13Aug 2, 2017Updated 9 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆34Jul 14, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 7 years ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆108Aug 1, 2023Updated 3 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆126May 4, 2026Updated 4 months ago
- Package to detect eQTLs jointly in multiple subgroups (e.g. tissues) via Bayesian Model Averaging.☆24Apr 16, 2018Updated 8 years ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆184Mar 11, 2026Updated 6 months ago
- A complete tool set for molecular QTL discovery and analysis☆65Apr 16, 2024Updated 2 years ago
- Framework for efficient high-dimensional association analyses.☆19Feb 11, 2026Updated 7 months ago
- Enhanced version of the FastQTL QTL mapper☆73Mar 19, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Exon-exon splice junctions across SRA☆43Jul 30, 2021Updated 5 years ago
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- ☆99Jul 21, 2025Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆14Mar 16, 2026Updated 6 months ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆27Oct 29, 2019Updated 6 years ago
- Collection of analysis tools for quantitative trait loci☆66Updated this week
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- ☆48Sep 15, 2026Updated last week
- ☆12Apr 25, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆24May 15, 2019Updated 7 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆16May 29, 2025Updated last year
- ☆22Dec 17, 2020Updated 5 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- Build Tangle-style interactive documents in the Jupyter/IPython Notebook☆12Feb 17, 2022Updated 4 years ago
- An R package for generating comparative regional association plots☆17Sep 30, 2025Updated 11 months ago