willtownes / scrna2019Links
supporting code for the multinomial single cell RNA-Seq paper
☆51Updated 4 years ago
Alternatives and similar repositories for scrna2019
Users that are interested in scrna2019 are comparing it to the libraries listed below
Sorting:
- ☆41Updated 4 years ago
- ☆28Updated 6 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- ☆35Updated 2 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆53Updated 3 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Normalize CITEseq Data☆65Updated last month
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 11 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- Multi-sample Unified Discriminant ANalysis☆73Updated 2 years ago
- An r package that works as a wrapper to homologene☆45Updated last year
- Cell type pipes for R☆51Updated last year
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Toolkit for Single-Cell Velocity☆56Updated 5 months ago
- ☆29Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Lightweight Iterative Gene set Enrichment in R☆56Updated 8 months ago
- ☆38Updated 2 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- ☆59Updated 9 months ago
- Clone of the Bioconductor repository for the scran package.☆41Updated 8 months ago
- ☆55Updated 4 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- ☆41Updated 3 weeks ago