debsin / dropClust
Version 2.1.0 released
☆23Updated 5 years ago
Alternatives and similar repositories for dropClust:
Users that are interested in dropClust are comparing it to the libraries listed below
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Updated 3 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Updated 6 years ago
- R package for gene selection using k-NN graphs.☆13Updated last year
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- ☆11Updated 5 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆17Updated 3 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- scover☆23Updated last year
- Source code and data supporting "Evaluating measures of association for single-cell transcriptomics"☆14Updated 6 years ago
- ☆12Updated 5 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- The million-scale method for single-cell analysis☆10Updated last year
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Multi-study integration of cellular trajectories☆19Updated 4 years ago
- ☆14Updated 5 years ago
- Gene Expression Decomposition and Integration☆18Updated 2 months ago
- ☆12Updated 4 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 7 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆18Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆13Updated 5 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Bayesian model selection to detect zero-inflated genes☆8Updated 4 years ago