dcjones / isolatorLinks
Rapid and robust analysis of RNA-Seq experiments.
☆32Updated 9 years ago
Alternatives and similar repositories for isolator
Users that are interested in isolator are comparing it to the libraries listed below
Sorting:
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Chromatin segmentation in R☆19Updated 7 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 6 months ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 10 months ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated last week
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- ☆12Updated last month
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆22Updated 3 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Updated 7 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- ☆22Updated 8 years ago
- stageR package☆13Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last month
- Allele frequency filter app☆14Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- ☆12Updated 5 years ago