gokceneraslan / pyannotablesLinks
Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
☆11Updated 3 months ago
Alternatives and similar repositories for pyannotables
Users that are interested in pyannotables are comparing it to the libraries listed below
Sorting:
- kallisto index tag extractor☆20Updated 6 years ago
- Single cell interactive plotting tools☆24Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- R API and htmlwidget for Vitessce☆44Updated 4 months ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 3 weeks ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 2 years ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 3 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 5 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆37Updated last month
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- ☆43Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆63Updated 9 months ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- ☆16Updated 4 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 5 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Single-cell Case Control Analysis☆52Updated last week
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- ☆15Updated 4 years ago
- ☆28Updated 6 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- scNMT-seq gastrulation☆42Updated 2 years ago
- ☆26Updated 7 months ago
- An R-based interface for loom files☆67Updated 5 years ago