gokceneraslan / pyannotablesLinks
Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
☆11Updated this week
Alternatives and similar repositories for pyannotables
Users that are interested in pyannotables are comparing it to the libraries listed below
Sorting:
- kallisto index tag extractor☆20Updated 6 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆51Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- ☆62Updated 6 months ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 11 months ago
- R API and htmlwidget for Vitessce☆42Updated last month
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- ☆13Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 2 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- ☆28Updated 6 years ago
- Tool for sharing, browsing and visualizing single-cell data stored in the Loom file format☆36Updated 8 months ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- ☆43Updated last year
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- ☆43Updated 4 years ago
- scover☆23Updated last year
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 5 years ago