gokceneraslan / pyannotablesLinks
Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
☆11Updated 3 months ago
Alternatives and similar repositories for pyannotables
Users that are interested in pyannotables are comparing it to the libraries listed below
Sorting:
- kallisto index tag extractor☆20Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Single cell interactive plotting tools☆24Updated 5 years ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 3 years ago
- R API and htmlwidget for Vitessce☆43Updated 5 months ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 5 years ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 3 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 9 months ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆44Updated last year
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated last month
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- ☆63Updated 9 months ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- ☆28Updated 6 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Updated 6 years ago
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆19Updated 4 months ago
- An R-based interface for loom files☆67Updated 5 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- ☆43Updated 5 years ago
- Inference of switch-like differential expression along single-cell trajectories☆21Updated 8 years ago
- R package for differential discovery analyses in high-dimensional cytometry data☆21Updated 11 months ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated 2 months ago
- ☆43Updated 2 years ago
- Tools for analyzing Slide-seq data☆31Updated 2 years ago
- ☆15Updated 5 years ago
- Collection of useful methods for single cell analysis☆15Updated last year