gokceneraslan / pyannotablesLinks
Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)
☆11Updated 2 years ago
Alternatives and similar repositories for pyannotables
Users that are interested in pyannotables are comparing it to the libraries listed below
Sorting:
- kallisto index tag extractor☆20Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- ☆11Updated 4 years ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 4 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆10Updated 6 years ago
- R API and htmlwidget for Vitessce☆40Updated 8 months ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- ☆19Updated 7 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- post-clustering differential expression test☆35Updated 6 years ago
- RNA velocity validation☆22Updated 3 years ago
- ☆23Updated last month
- ☆41Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last month
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated last month
- scover☆23Updated last year
- ☆14Updated 6 years ago
- Automated cell filtering for single-cell RNA sequencing data☆24Updated last year
- A method to rapidly assess cell type identity using both functional and random gene sets☆13Updated 6 years ago
- Version 2.1.0 released☆23Updated 5 years ago