slowkow / homerkitLinks
Read HOMER motif analysis output in R.
☆17Updated 7 years ago
Alternatives and similar repositories for homerkit
Users that are interested in homerkit are comparing it to the libraries listed below
Sorting:
- A tidy interface for coverage analysis☆30Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 10 months ago
- R package wrapping bedtools☆44Updated 6 months ago
- HOT regions paper☆11Updated 6 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 9 months ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Transcript quantification import with automatic metadata detection☆67Updated last week
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Updated 5 years ago
- Devel repository for minfi☆60Updated last year
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- ☆13Updated 8 years ago
- Workshop for CNV analysis with Bioconductor☆17Updated 9 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- An R for fast and flexible DNA methylation analysis☆34Updated this week
- Glimma R package☆50Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Representation and manipulation of genomic intervals☆46Updated 2 weeks ago
- Genomic plot in trellis layout☆41Updated last year
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Updated 5 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- A collection of R functions to aid in host-pathogen genomic research☆11Updated last year