Read HOMER motif analysis output in R.
☆18Mar 1, 2018Updated 8 years ago
Alternatives and similar repositories for homerkit
Users that are interested in homerkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- CLIP Tool Kit (CTK)☆22Apr 28, 2024Updated 2 years ago
- Pipeline to analyse ChIP-Rx data, i.e ChIP-Seq with reference exogenous genome spike-in normalization☆14Apr 11, 2026Updated 5 months ago
- "Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus R…☆13Jan 7, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A suite for the analysis of CLIP-Seq datasets.☆12Jan 31, 2022Updated 4 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- API for HOMER in R for Genomic Analysis using Tidy Conventions☆19Dec 1, 2021Updated 4 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- snakemake workflow for post-processing scATACseq data☆23Jul 15, 2020Updated 6 years ago
- Analysis and Visualization of Ribosome Profiling Data☆12Dec 14, 2019Updated 6 years ago
- 学堂在线 课程视频及字幕 aria2下载脚本☆21Aug 27, 2017Updated 9 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- Pipeline to find transcription factor footprints in DNase-seq or ATAC-seq datasets☆13Nov 24, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- HOT regions paper☆11Jun 18, 2019Updated 7 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- command-line querying+conversion of bigwigs and a nim wrapper for dpryan's libbigwig☆17May 2, 2020Updated 6 years ago
- collection of notebooks with different cytoscape workflows☆51Mar 22, 2023Updated 3 years ago
- Orchestrating Hi-C analysis with Bioconductor☆11Jul 11, 2025Updated last year
- A small R package to make sequencing read coverage plots in R.☆43Apr 3, 2026Updated 5 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆38Jul 5, 2021Updated 5 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Aug 22, 2025Updated last year
- Genomic plot in trellis layout☆43Jan 30, 2026Updated 7 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Ultraperformant reimplementation of SICER☆60Dec 1, 2025Updated 9 months ago
- Snakemake pipeline for running MAJIQ☆23Dec 20, 2023Updated 2 years ago
- R package for WebGestalt☆38Aug 10, 2026Updated last month
- Integrating zingeR with ZINB-WaVE weights☆26Feb 15, 2018Updated 8 years ago
- Harvard FAS informatics scRNAseq workshop website☆40Aug 8, 2019Updated 7 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Feb 9, 2021Updated 5 years ago
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 7 years ago
- Python 图片爬虫☆34Dec 17, 2017Updated 8 years ago
- ☆17Jul 19, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆15Apr 2, 2025Updated last year
- A snakemake pipeline for 10X genomics cellranger☆23Oct 13, 2025Updated 11 months ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- C++ wrapper to tabix indexer☆18Jun 27, 2025Updated last year
- GREAT Analysis - Functional Enrichment on Genomic Regions☆100Jan 30, 2026Updated 7 months ago
- Course materials for the edX Data Analysis for Genomics☆36May 23, 2015Updated 11 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆17Jul 7, 2023Updated 3 years ago