cotsapaslab / jlim
☆10Updated 2 years ago
Alternatives and similar repositories for jlim:
Users that are interested in jlim are comparing it to the libraries listed below
- An R package for generating comparative regional association plots☆18Updated 3 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated last year
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 10 months ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 8 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Updated 4 years ago
- An interactive graphical illustration of genetic associations and their biological context☆16Updated last year
- Pairwise Hierarchical Model☆17Updated 3 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Code for implementing Mendelian randomization investigations☆17Updated 9 years ago
- Multi-Omic Strategies for TWAS☆13Updated 2 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆11Updated 5 years ago
- Sample code for ldsc analyses in UKBB☆30Updated last year
- ☆16Updated last year
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- cEll tyPe enrIChment☆14Updated 2 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- haploR: utilities for mining Haploreg and other similar web-based tools☆9Updated last year
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆28Updated 4 years ago
- Total and allele specific read based cis-QTL, fine-mapping, and prediction☆9Updated 4 years ago
- ☆13Updated 2 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆21Updated 4 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated last year