slowkow / tftargets
Human transcription factor target genes from 6 databases in convenient R format.
☆86Updated 6 years ago
Alternatives and similar repositories for tftargets:
Users that are interested in tftargets are comparing it to the libraries listed below
- ☆53Updated 3 weeks ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆65Updated 7 years ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- ConsensusTME Gene Sets and R Script☆39Updated 9 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated 5 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- ☆53Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Explore and share your scRNAseq clustering results☆50Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- ☆38Updated 4 years ago
- ☆67Updated 6 years ago
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- consistent quantification of external RNA-seq data sets☆58Updated last year
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- An R-based interface for loom files☆66Updated 4 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆47Updated 3 years ago
- An R interface to enrichR☆90Updated last month
- Normalize CITEseq Data☆65Updated 8 months ago
- A tool for removing doublets from single-cell RNA-seq data☆72Updated 4 years ago
- Explore and download data from the recount3 project☆33Updated 3 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated last year
- Clone of the Bioconductor repository for the DropletUtils package.☆57Updated 3 months ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated last year