jacobhepkema / scoverLinks
scover
☆23Updated last year
Alternatives and similar repositories for scover
Users that are interested in scover are comparing it to the libraries listed below
Sorting:
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆28Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆34Updated 3 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Pairwise Hierarchical Model☆19Updated 3 years ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- ☆12Updated 4 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆20Updated last year
- Gene Expression Decomposition and Integration☆18Updated 5 months ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆16Updated 3 months ago
- ☆12Updated 5 years ago
- ☆23Updated 3 years ago
- ☆22Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Vaeda method for computational doublet annotation☆17Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- ☆29Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Single-cell immune repertoire trajectory analysis in R☆11Updated 2 weeks ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated last year
- Snakemake pipeline for microexon discovery and quantification☆20Updated 6 months ago