☆18Oct 22, 2024Updated last year
Alternatives and similar repositories for OCAT
Users that are interested in OCAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of files to do genomics analysis on python☆18Jun 5, 2025Updated 9 months ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆11Oct 31, 2024Updated last year
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Oct 23, 2024Updated last year
- ☆11Sep 17, 2020Updated 5 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆15May 4, 2021Updated 4 years ago
- ☆20Jul 16, 2024Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- ☆11Jul 22, 2020Updated 5 years ago
- Transposable element expression at unique loci in single cells with CELLO-seq☆11Jun 17, 2024Updated last year
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 3 months ago
- MuDCoD: Multi-subject Dynamic Community Detection☆11Mar 18, 2025Updated last year
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- ☆13Feb 12, 2026Updated last month
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 5 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Oct 31, 2022Updated 3 years ago
- Vaeda method for computational doublet annotation☆19Feb 1, 2026Updated last month
- Mosaic single cell data integration using non-overlapping features☆38Sep 20, 2022Updated 3 years ago
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 5 years ago
- Multi-resolution Variational Inference☆23Mar 16, 2026Updated last week
- ☆17Apr 9, 2021Updated 4 years ago
- Code for the paper on t-SNE with variable degree of freedom☆12Jun 27, 2019Updated 6 years ago
- Comparison of single cell normalization strategies☆10Aug 13, 2021Updated 4 years ago
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 5 years ago
- ☆13Jan 23, 2025Updated last year
- hazard and excess hazard modelling with multidimensional penalized splines☆12Dec 2, 2024Updated last year
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 3 years ago
- ☆12Nov 7, 2022Updated 3 years ago
- The analysis pipeline for FLEP-seq☆17Aug 18, 2023Updated 2 years ago
- ☆12Dec 7, 2020Updated 5 years ago
- Paired Insertion Counting for snATAC-seq data☆19Mar 15, 2026Updated last week
- ☆13Mar 29, 2024Updated last year
- ☆12Dec 4, 2023Updated 2 years ago
- ☆10Dec 11, 2024Updated last year
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆12Mar 7, 2023Updated 3 years ago