☆18Oct 22, 2024Updated 2 years ago
Alternatives and similar repositories for OCAT
Users that are interested in OCAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of files to do genomics analysis on python☆19Jun 5, 2025Updated last year
- ☆11Sep 17, 2020Updated 6 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated 2 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- Source code of the R packge BgeeDB to use data from the Bgee database☆16May 7, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- Total copy number inference from single-cell RNA and ATAC sequing with cell clustering☆12Oct 31, 2024Updated 2 years ago
- MuDCoD: Multi-subject Dynamic Community Detection☆11Sep 27, 2026Updated last month
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 6 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- A tool for visualisation of gene set over-representation analysis (GSOA).☆10Jun 27, 2019Updated 7 years ago
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).☆13Aug 26, 2026Updated 2 months ago
- ☆21Jul 16, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Oct 31, 2022Updated 4 years ago
- In-silico doublet annotation for single cell RNA sequencing data☆11Jan 7, 2026Updated 9 months ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 3 years ago
- R package for transcriptomic biological age analysis☆29Sep 29, 2026Updated last month
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Jan 6, 2021Updated 5 years ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 10 months ago
- H2M is a Python pipeline for precise modeling of human variants in the mouse genome.☆15Oct 9, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- hazard and excess hazard modelling with multidimensional penalized splines☆12Mar 25, 2026Updated 7 months ago
- PhiSpace for continuous phenotyping single-cell and spatial transcriptomics data☆18Oct 12, 2026Updated 2 weeks ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆11Oct 29, 2021Updated 5 years ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- The analysis pipeline for FLEP-seq☆18Aug 18, 2023Updated 3 years ago
- A C++ package that enables the bulk retrieval, processing, and assembly of transcriptome datasets☆12Jan 20, 2026Updated 9 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 4 years ago
- Multi-resolution Variational Inference☆24Oct 19, 2026Updated last week
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆13May 19, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Nov 7, 2022Updated 3 years ago
- Paired Insertion Counting for snATAC-seq data☆19Aug 17, 2026Updated 2 months ago
- Mosaic single cell data integration using non-overlapping features☆40Sep 20, 2022Updated 4 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Code for the paper on t-SNE with variable degree of freedom☆11Jun 27, 2019Updated 7 years ago
- ☆10Dec 11, 2024Updated last year
- Mixed Effect Machine Learning☆10Apr 16, 2020Updated 6 years ago