pachterlab / GFCP_2022Links
RNA velocity validation
☆22Updated 3 years ago
Alternatives and similar repositories for GFCP_2022
Users that are interested in GFCP_2022 are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 4 months ago
- ☆29Updated 2 years ago
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- benchmark for single-cell RNA-seq imputation methods☆26Updated last year
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆50Updated last year
- ☆44Updated 9 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- ☆27Updated 4 months ago
- ☆40Updated this week
- Vaeda method for computational doublet annotation☆17Updated last year
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆53Updated 2 months ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆39Updated 4 years ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆25Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Visualizing Somatic Alterations of 10X Spatial Transcriptomics Data☆12Updated 8 months ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆18Updated 3 years ago
- ☆41Updated 4 years ago
- Landscape Single Cell Entropy☆20Updated 4 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- scover☆23Updated last year
- The scripts used for analyzing JAX mouse dataset☆25Updated 9 months ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago