cjneely10 / MetaSanityLinks
Pipeline for major biological analyses.
☆36Updated 3 years ago
Alternatives and similar repositories for MetaSanity
Users that are interested in MetaSanity are comparing it to the libraries listed below
Sorting:
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆40Updated 3 months ago
- ☆45Updated 2 years ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆51Updated last year
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆71Updated last month
- Unified Human Gut Virome Catalog☆40Updated 2 months ago
- A toolkit for prokaryotic comparative genomics☆51Updated 3 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 9 months ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆45Updated 5 months ago
- PLSDB pipeline to collect bacterial plasmids from NCBI☆39Updated last year
- MAG Circularization Method☆32Updated 2 months ago
- Prophage Activity Estimator☆30Updated last year
- Bioinformatic Tools for study Evolution of metabolic diversity☆38Updated last year
- ☆42Updated 7 months ago
- ☆81Updated last month
- a python package for automated generation of phylogenetic trees from genbank files☆23Updated 2 months ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆40Updated 3 years ago
- Improvement of metagenome-assembled genomes☆54Updated 5 years ago
- Automatic eukaryotic taxonomic classification☆29Updated 8 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Updated 2 weeks ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆25Updated last year
- ☆31Updated 3 months ago
- Scalable creating/updating of metagenome profiling databases☆63Updated 6 months ago
- ☆31Updated last year
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆38Updated 3 years ago
- ☆33Updated 3 months ago
- A simple program to classify the lifestyle of phages.☆17Updated 2 years ago
- ☆41Updated 4 years ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆31Updated 2 years ago
- PHANOTATE: a gene caller for phages.☆80Updated last year
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆28Updated 8 months ago