Alternatives and similar repositories for MetaSanity:

Users that are interested in MetaSanity are comparing it to the libraries listed below

• Kalan-Lab / lsaBGC
  lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters
  ☆37Updated 7 months ago
• zreitz / multismash
  A workflow and scripts for large-scale antiSMASH analyses
  ☆37Updated 2 months ago
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆31Updated last year
• apcamargo / taxopy
  A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers
  ☆46Updated last month
• NBChub / bgcflow
  Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)
  ☆40Updated 2 months ago
• functional-dark-side / agnostos-wf
  ☆45Updated last year
• happykhan / BRIG
  BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…
  ☆34Updated 6 years ago
• XiaofangJ / PhaseFinder
  A pipeline to computationally identify invertible DNA regions and quantify their orientations.
  ☆29Updated last year
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆58Updated 3 weeks ago
• deprekate / PHANOTATE
  PHANOTATE: a tool to annotate phage genomes.
  ☆72Updated 3 months ago
• EBI-Metagenomics / mettannotator
  ☆67Updated last week
• pereiramemo / BiG-MEx
  BiG-MEx implementation as Docker images and R packages
  ☆13Updated 3 years ago
• SWittouck / SCARAP
  A toolkit for prokaryotic comparative genomics
  ☆45Updated last month
• drboothtj / getphylo
  a python package for automated generation of phylogenetic trees from genbank files
  ☆20Updated last week
• ohlab / GRiD
  Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …
  ☆32Updated 4 years ago
• BackofenLab / CRISPRidentify
  ☆27Updated 2 months ago
• Finn-Lab / SanntiS
  SMBGC Annotation using Neural Networks Trained on Interpro Signatures
  ☆25Updated 2 weeks ago
• CCB-SB / plsdb
  PLSDB pipeline to collect bacterial plasmids from NCBI
  ☆38Updated 4 months ago
• annejong / BAGEL4
  ☆15Updated last year
• brinkmanlab / islandpath
  IslandPath standalone software
  ☆31Updated last year
• apcamargo / ictv-mmseqs2-protein-database
  ☆29Updated last month
• EBI-Metagenomics / EukCC
  Tool to estimate genome quality of microbial eukaryotes
  ☆36Updated last month
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆61Updated 4 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated 11 months ago
• kelwyres / Bactabolize
  ☆38Updated 3 months ago
• davidemms / SHOOT
  SHOOT.bio - the phylogenetic search engine
  ☆24Updated last year
• michaelkyu / PlasX
  PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
  ☆32Updated 3 years ago
• raw-lab / MetaCerberus
  Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…
  ☆55Updated 2 weeks ago
• gatech-genemark / MetaGeneMark-2
  MetaGeneMark-2: Improved Gene Prediction in Metagenomes
  ☆19Updated 11 months ago
• leylabmpi / Struo
  Ley Lab MetaGenome Profiler DataBase generator
  ☆49Updated 2 years ago