cjneely10 / MetaSanityLinks
Pipeline for major biological analyses.
☆35Updated 3 years ago
Alternatives and similar repositories for MetaSanity
Users that are interested in MetaSanity are comparing it to the libraries listed below
Sorting:
- A workflow and scripts for large-scale antiSMASH analyses☆41Updated 2 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 2 months ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆34Updated last year
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆50Updated 4 months ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆42Updated 8 months ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆27Updated 2 months ago
- ☆72Updated last month
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆29Updated last year
- A toolkit for prokaryotic comparative genomics☆49Updated 5 months ago
- ☆30Updated 5 months ago
- UFCG: Universal Fungal Core Genes☆33Updated 4 months ago
- ☆45Updated last year
- KEGG Module Evaluation Tool☆30Updated last year
- a python package for automated generation of phylogenetic trees from genbank files☆22Updated 3 months ago
- ☆32Updated 4 months ago
- Unified Human Gut Virome Catalog☆32Updated 11 months ago
- A python library for predicting phage lifestyle based on genome sequence☆38Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆59Updated last week
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆34Updated 6 years ago
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆50Updated 3 weeks ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆35Updated 3 years ago
- IslandPath standalone software☆32Updated last year
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 4 months ago
- PHANOTATE: a gene caller for phages.☆77Updated 6 months ago
- PLSDB pipeline to collect bacterial plasmids from NCBI☆38Updated 8 months ago
- GTDB taxonomy taxdump files with trackable TaxIds☆54Updated last month
- MacSyFinder models allowing for a systematic search of anti-phage systems☆23Updated 4 months ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- ☆15Updated last year