ziyewang / COMEBin
☆52Updated last year
Alternatives and similar repositories for COMEBin:
Users that are interested in COMEBin are comparing it to the libraries listed below
- ☆53Updated last year
- ☆50Updated last year
- GTDB taxonomy taxdump files with trackable TaxIds☆53Updated last week
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆59Updated this week
- Improvement of metagenome-assembled genomes☆52Updated 5 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆40Updated 6 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆49Updated 10 months ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆57Updated 2 weeks ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆62Updated 3 months ago
- code repo for mobileOG-db☆35Updated 3 months ago
- Binning Virus Genomes from Metagenomes☆62Updated 2 years ago
- A pipeline for nanopore long-read metagenomic analysis.☆35Updated last week
- ☆28Updated last year
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆47Updated 3 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆21Updated last year
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆34Updated 3 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated last week
- Taxonomic classification of viruses at Order and Family level☆20Updated 2 years ago
- Discover and annotate the virome☆41Updated 3 weeks ago
- ☆70Updated this week
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆32Updated last year
- ☆35Updated last year
- Contains a fasta format database of a large variety of mobile genetic elements and an annotation file☆46Updated 3 years ago
- Bioinformatics pipeline for recovery and analysis of metagenome-assembled genomes☆46Updated last month
- Tool to estimate genome quality of microbial eukaryotes☆37Updated 3 months ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated 2 years ago
- ☆26Updated last year
- An algorithm for clustering metagenomic sequences.☆36Updated last month
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- ☆30Updated 2 months ago