Nextflow pipeline for genome annotation of protein-coding genes
☆16Dec 21, 2023Updated 2 years ago
Alternatives and similar repositories for geneidx
Users that are interested in geneidx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated 2 months ago
- ☆17Jun 15, 2026Updated 4 months ago
- Unzip assembly graphs with Hi-C data and/or long reads.☆29May 7, 2026Updated 5 months ago
- ☆33Jul 9, 2024Updated 2 years ago
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.☆24Sep 1, 2021Updated 5 years ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 4 years ago
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆10Oct 29, 2020Updated 5 years ago
- Paired REad TEXTure Mapper. Converts SAM formatted read pairs into genome contact maps.☆28Jul 15, 2026Updated 3 months ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆203May 11, 2025Updated last year
- PoSeiDon: positive selection detection and recombination analysis pipeline☆40Sep 22, 2025Updated last year
- Find Unique genomic Regions☆34Sep 29, 2026Updated 2 weeks ago
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Aug 24, 2026Updated last month
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- genome annotation (RNAseq and TE) pipeline (draft)