rnajena / poseidonLinks
PoSeiDon: positive selection detection and recombination analysis pipeline
☆39Updated 3 months ago
Alternatives and similar repositories for poseidon
Users that are interested in poseidon are comparing it to the libraries listed below
Sorting:
- Improved Phased Assembler☆28Updated 3 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 11 months ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated last year
- scripts to parse and analyse MCScanX collinearity output☆33Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- convert a blast output to a bed file☆12Updated 10 years ago
- ☆35Updated 5 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Updated 3 years ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Updated 3 years ago
- Computational Analysis of Gene Expression Evolution☆44Updated 4 months ago
- ☆26Updated 4 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 4 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- ☆26Updated 7 years ago
- Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequenc…☆36Updated 5 months ago
- TELR is a fast non-reference transposable element detector from long read sequencing data.☆35Updated 2 years ago
- Infering ancestral synteny with hierarchical orthologous groups☆36Updated 2 months ago
- Genome-Genome circle synteny☆25Updated 2 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆47Updated 2 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 8 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 7 years ago