formbio / FLAGLinks
☆32Updated last year
Alternatives and similar repositories for FLAG
Users that are interested in FLAG are comparing it to the libraries listed below
Sorting:
- Multi-genome synteny block visualization tool☆42Updated 5 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆23Updated this week
- Genome Annotation Pipeline☆36Updated 10 months ago
- A tool for evaluating long-read de novo assembly results☆36Updated 10 months ago
- Tool for fully-automated inference of species trees from raw genome assemblies☆38Updated last month
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆31Updated 6 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆33Updated 3 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆35Updated 2 years ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆27Updated 3 years ago
- Dinoflagellate Annotation Workflow☆15Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 3 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆36Updated 5 months ago
- ☆32Updated 4 years ago
- A tool for evaluate long-read de novo assembly results☆48Updated 10 months ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Computational Analysis of Gene Expression Evolution☆43Updated last week
- ☆28Updated last year
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- Tiberius is a deep learning gene finder.☆67Updated last week
- ContScout sequence contamination filter tool☆20Updated last month
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 5 months ago
- ☆40Updated 2 years ago
- ☆30Updated 6 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- kmerfreq count K-mer (with size K) frequency from the input sequence data, typically sequencing reads data, and refe rence genome data is…☆19Updated 5 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 8 months ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- Chromosome-level synteny plotting using orthologous regions☆29Updated 9 months ago