anonconda / TranSuiteLinks
A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.
☆22Updated 4 years ago
Alternatives and similar repositories for TranSuite
Users that are interested in TranSuite are comparing it to the libraries listed below
Sorting:
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Updated 2 years ago
- Invertory of TE-gene isoforms☆14Updated 2 years ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆16Updated 2 years ago
- toolkit to process gtf files☆17Updated 4 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- ☆28Updated 3 years ago
- Consensus genome annotation using OMA☆31Updated 3 weeks ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 10 months ago
- Distribution of TEs and their relationship to genes in host genome☆24Updated 2 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Updated 9 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 4 years ago
- Haplotype and population structure inference using neural networks.☆28Updated last year
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Updated 2 weeks ago
- Bash scripts and data used in pantranscriptomic paper☆24Updated 3 years ago
- Repository for pipeline code☆26Updated last year
- Computational Analysis of Gene Expression Evolution☆45Updated 5 months ago
- scripts to parse and analyse MCScanX collinearity output☆32Updated 5 years ago
- TD2☆31Updated 3 weeks ago
- Snakemake pipeline to analyze transposable element 'omics data.☆30Updated 3 weeks ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆22Updated 3 months ago
- ☆19Updated last year
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆24Updated last week
- Scoring GT/AG sites for improving spliced alignment☆50Updated 3 months ago
- CDS prediction in transcripts☆24Updated 11 months ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- An R package to infer and analyze synteny networks from protein sequences☆36Updated 6 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 10 months ago