A software suite for accurate identification, annotation, translation, and feature characterization of annotate transcripts.
☆24Sep 1, 2021Updated 5 years ago
Alternatives and similar repositories for TranSuite
Users that are interested in TranSuite are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy to Annotate Helitrons Unix-like command line.☆10Feb 14, 2024Updated 2 years ago
- Nextflow pipeline for genome annotation of protein-coding genes☆16Dec 21, 2023Updated 2 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jun 18, 2026Updated 2 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last month
- Enumerating bubbles in pangenome graphs☆16Aug 26, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 7 months ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- ☆21Apr 20, 2026Updated 4 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆33Jun 3, 2022Updated 4 years ago
- ☆20Oct 4, 2023Updated 2 years ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆114Jul 11, 2026Updated last month
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆18Aug 25, 2026Updated last week
- Domain based annotation of transposable elements☆25Jul 21, 2026Updated last month
- A pipeline for differential expression and differential alternative splicing analysis☆70Apr 26, 2024Updated 2 years ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 7 months ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 5 months ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated last year
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 基因组组装注释流程及脚本☆15Feb 12, 2023Updated 3 years ago
- FlashRNA - An Efficient Model for Regulatory Genomics☆18Oct 15, 2025Updated 10 months ago
- A set of R functions that help faciliate a lot of tedious processing☆19Aug 31, 2018Updated 8 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Improved long-read assembly by preserving contained reads☆29Aug 22, 2024Updated 2 years ago
- ☆24Jul 29, 2025Updated last year
- Tree reconstruction of ancestry using incomplete lineage sorting☆11Jan 9, 2026Updated 7 months ago
- General Use Scripts and Helper functions☆15Mar 29, 2018Updated 8 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆28Feb 28, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Gene Family Annotation Workflow☆12Mar 26, 2024Updated 2 years ago
- The IntroBlocker ancestry inference algorithm☆18Oct 24, 2023Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- reference-free transcriptome assembly for short and long reads☆112Mar 13, 2026Updated 5 months ago
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- TD2☆41May 17, 2026Updated 3 months ago
- Gmove is a gene prediction tool☆21Oct 9, 2024Updated last year