EvolBioInf / fur
Find Unique genomic Regions
☆29Updated last month
Alternatives and similar repositories for fur:
Users that are interested in fur are comparing it to the libraries listed below
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago
- a Contig Alignment Tool for Pairwise Assembly Comparison☆13Updated 5 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Haplotype-aware genome assembly toolkit☆29Updated 5 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Fast and space-efficient taxonomic classification of long reads☆43Updated 2 months ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Updated 2 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆51Updated 3 weeks ago
- A method of assessing sequence complexity based on kmer frequencies☆32Updated 7 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆31Updated this week
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last year
- ☆27Updated 3 years ago
- Correcting errors in noisy long reads using variation graphs☆51Updated 2 years ago
- Implementation of ToL genome assembly workflows☆20Updated last week
- Colinear block visualisation tool☆30Updated last year
- ☆30Updated last year
- Interactive, web tool for exploring pan-genome of bacterial strains☆45Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated last year
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆41Updated 4 years ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Updated last month
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆15Updated 3 years ago
- Annotated Genome Optimization Using Transcriptome Information☆19Updated 4 years ago
- ☆20Updated 3 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆34Updated last week
- Quality control plotting for long reads☆10Updated 11 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated last year