EvolBioInf / furLinks
Find Unique genomic Regions
☆30Updated last month
Alternatives and similar repositories for fur
Users that are interested in fur are comparing it to the libraries listed below
Sorting:
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Updated 3 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 5 years ago
- Reference genome quality scores☆21Updated 4 years ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆35Updated 4 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- transposable element typing pipeline☆19Updated last year
- ☆30Updated 2 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- ☆45Updated last week
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated last month
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Implementation of ToL genome assembly workflows☆23Updated this week
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 6 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆55Updated 6 months ago
- Remove lambda phage reads from a fastq file☆29Updated 2 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆14Updated 3 years ago
- A versatile toolkit for k-mers with taxonomic information☆80Updated last month
- ☆29Updated 4 years ago
- Searching DNA/RNA sequence databases with PCR and/or probe queries☆22Updated last year
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Updated 2 years ago
- Read contamination removal☆25Updated last year
- Linear-time de novo Long Read Assembler☆41Updated 8 months ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 5 years ago
- A k-mer search engine for all Sequence Read Archive public accessions☆35Updated 11 months ago
- Improved Phased Assembler☆28Updated 3 years ago