EvolBioInf / furLinks
Find Unique genomic Regions
☆32Updated last week
Alternatives and similar repositories for fur
Users that are interested in fur are comparing it to the libraries listed below
Sorting:
- Symmetric DUST for finding low-complexity regions in DNA sequences☆45Updated 6 months ago
- ☆30Updated 2 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 6 years ago
- Fast and scalable nanopore adaptive sampling☆34Updated 2 years ago
- ☆46Updated 2 months ago
- URMAP ultra-fast read mapper☆38Updated 5 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 9 months ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- ☆29Updated 4 years ago
- Strain-level haplotyping for metagenomes with short or long-reads.☆63Updated 9 months ago
- Remove lambda phage reads from a fastq file☆29Updated 3 years ago
- MegaPath-Nano: Accurate Compositional Analysis and Drug-level Antimicrobial Resistance Detection Software for Oxford Nanopore Long-read M…☆13Updated 3 years ago
- Code to create a PRG from a Multiple Sequence Alignment file☆25Updated 4 months ago
- Reference genome quality scores☆21Updated 5 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Updated 4 years ago
- transposable element typing pipeline☆19Updated last year
- Output FASTQ summary statistics in JSON format☆29Updated 3 years ago
- CAMITAX: Taxon labels for microbial genomes☆30Updated 2 years ago
- A method of assessing sequence complexity based on kmer frequencies☆33Updated 7 years ago
- VIRULIGN: fast codon-correct alignment and annotation of viral genomes☆35Updated 4 years ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 6 years ago
- PanTax: Strain-level metagenomic profiling using pangenome graphs☆45Updated last week
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆36Updated 3 weeks ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 6 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Updated 3 years ago
- Non-redundant pangenome assemblies from multiple genomes or bins☆15Updated 8 months ago