gosianow / DRIMSeqLinks
Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=DRIMSeq or https://github.com/gosianow/DRIMSeq/issues
☆11Updated 5 years ago
Alternatives and similar repositories for DRIMSeq
Users that are interested in DRIMSeq are comparing it to the libraries listed below
Sorting:
- Functions to compare a SV call sets against a truth set.☆30Updated last month
- ☆12Updated 2 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last week
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 4 years ago
- ☆23Updated 7 months ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 3 years ago
- Immuological gene typing and annotation for genome assembly☆37Updated 4 months ago
- Two pass alignment for long reads☆22Updated 4 years ago
- Haplotype and population structure inference using neural networks.☆27Updated 8 months ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆29Updated 10 months ago
- toolkit to process gtf files☆17Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- Enabling differential allele-specific analysis☆11Updated 7 months ago
- BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool☆22Updated 2 years ago
- Population-wide Deletion Calling☆35Updated 3 months ago
- Mutation rate analysis of autosomal loci☆14Updated 5 years ago
- Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)☆17Updated last week
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- Splice junction analysis and filtering from BAM files☆40Updated 3 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 5 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 4 months ago
- End-guided RNA assembler☆15Updated 3 weeks ago
- Repository for pipeline code☆26Updated last year
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing☆21Updated 3 years ago
- Distribution of TEs and their relationship to genes in host genome☆22Updated 2 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- Long read to rMATS☆32Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆24Updated 3 weeks ago