General Use Scripts and Helper functions
☆15Mar 29, 2018Updated 8 years ago
Alternatives and similar repositories for gscripts
Users that are interested in gscripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks☆10Feb 16, 2022Updated 4 years ago
- Repository☆10Oct 23, 2024Updated last year
- Sashimi plots for RNA-seq data using detected transcripts☆34Jul 31, 2026Updated last week
- ☆42Sep 29, 2022Updated 3 years ago
- ☆12Feb 19, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Short course using RStudio for biological data analysis☆14Jul 7, 2022Updated 4 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 8 years ago
- ☆24Jul 29, 2025Updated last year
- Bedfile perturbation tool☆17Mar 6, 2026Updated 5 months ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- ☆11Sep 17, 2020Updated 5 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 5 years ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 4 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆14Aug 5, 2020Updated 6 years ago
- Perl scripts for analysis RIC-seq data☆11Feb 6, 2020Updated 6 years ago
- CLIP Tool Kit (CTK)☆22Apr 28, 2024Updated 2 years ago
- A tool to identify CLIP-seq peaks☆73Oct 31, 2025Updated 9 months ago
- DTU analysis tool inspired by llamas☆12May 22, 2026Updated 2 months ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆13Apr 14, 2026Updated 3 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆13Jun 16, 2025Updated last year
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 6 months ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 4 months ago
- New computational framework to process and analyze KAS-seq and spKAS-seq data.☆16Dec 5, 2023Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- ✂️ Trim sequencing adapters from NGS data automatically☆14Sep 5, 2025Updated 11 months ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 6 years ago
- Quantitation and visualization of differential alternative splicing events☆11May 2, 2023Updated 3 years ago
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Jan 25, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆27May 8, 2022Updated 4 years ago
- Analysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility☆18Aug 5, 2021Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆39Mar 21, 2026Updated 4 months ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆20Apr 23, 2025Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆68Sep 12, 2023Updated 2 years ago
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- four class intro to R: basic syntax, data manipulation, data viz☆21Dec 31, 2020Updated 5 years ago