yhw320 / PanSynLinks
☆21Updated last year
Alternatives and similar repositories for PanSyn
Users that are interested in PanSyn are comparing it to the libraries listed below
Sorting:
- ☆44Updated 3 weeks ago
- Robust identification of orthologous Synteny with the Orthology Index☆36Updated 2 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 11 months ago
- ☆29Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago
- ☆21Updated last year
- Multi-genome synteny block visualization tool☆52Updated 2 months ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- ☆45Updated 3 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated 2 weeks ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆30Updated 3 months ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆34Updated 7 months ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- Dinoflagellate Annotation Workflow☆15Updated 3 years ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Updated 6 years ago
- ☆24Updated last month
- ☆29Updated 2 weeks ago
- Genome Annotation Pipeline☆42Updated last year
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 10 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 6 months ago
- Plant genome assembly and annotation pipeline using snakemake☆51Updated 7 months ago
- ☆33Updated 9 months ago
- ☆41Updated 2 years ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Updated last year
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆18Updated 2 years ago
- Automatic evaluation of HGTs☆30Updated 11 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆36Updated last year
- ☆42Updated 5 months ago