Long RNA-seq analysis workflow
☆22Oct 13, 2025Updated 6 months ago
Alternatives and similar repositories for LyRic
Users that are interested in LyRic are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Merge transcriptome read-to-genome alignments into non-redundant transcript models☆20Jan 21, 2026Updated 3 months ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Apr 7, 2024Updated 2 years ago
- convert CHAIN format to PAF format☆15Dec 17, 2024Updated last year
- miRTrace☆12Jun 14, 2023Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆43Mar 21, 2026Updated last month
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆13Aug 5, 2020Updated 5 years ago
- Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, b…☆11Dec 8, 2022Updated 3 years ago
- ☆21Apr 20, 2026Updated 2 weeks ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆11May 12, 2025Updated 11 months ago
- ☆12Apr 24, 2026Updated 2 weeks ago
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 3 months ago
- a tool to detect differentially expressed circular RNA☆13Nov 12, 2025Updated 5 months ago
- Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy …☆23Feb 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 6 months ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- ☆11Sep 28, 2021Updated 4 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆32Jun 12, 2025Updated 10 months ago
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 9 years ago
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago
- Nextflow pipeline for genome annotation of protein-coding genes☆16Dec 21, 2023Updated 2 years ago
- Distributed Deep Learning Tutorial☆21Mar 10, 2026Updated last month
- General purpose utility related to GAF files☆29May 1, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A flexible processor for sequencing reads☆26Mar 25, 2026Updated last month
- Coding-Potential Assessment Tool using an alignment-free logistic regression model☆17Feb 29, 2024Updated 2 years ago
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- Blogpost about installing packages and getting package dependencies☆17Aug 9, 2018Updated 7 years ago
- Python wrapper for wavefront alignment using WFA2-lib☆38Nov 19, 2024Updated last year
- A suite of tools for evolutionary and functional analysis of microRNA binding sites http://www.targetscan.org☆47Oct 29, 2018Updated 7 years ago
- high-performance BED-to-GTF converter written in Rust☆20Mar 19, 2026Updated last month
- Nascent Transcription Processing Pipeline☆22Apr 30, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF☆272Mar 15, 2026Updated last month
- ☆15Apr 26, 2023Updated 3 years ago
- miRge - microRNA alignment software for small RNA-seq data, now at v2.0☆28Mar 23, 2022Updated 4 years ago
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- Iso-Seq reads simulator for PacBio and ONT full-length isoform sequencing technologies☆16Mar 1, 2022Updated 4 years ago
- Rust bindings to the wavefront algorithm C implementation☆17Sep 20, 2022Updated 3 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆15Apr 4, 2024Updated 2 years ago