Alternatives and similar repositories for jnormcorre

Users that are interested in jnormcorre are comparing it to the libraries listed below

• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆62Updated last year
• paninski-lab / funimag
  Compression, denoising and demixing of functional imaging recordings
  ☆28Updated 7 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆96Updated last year
• llerussell / Bruker_PrairieLink
  Stream data from PrairieView into MATLAB to allow online processing and analysis
  ☆12Updated last year
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆38Updated last year
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆32Updated 5 years ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆27Updated 6 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆64Updated this week
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆27Updated last week
• catalystneuro / roiextractors
  Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…
  ☆15Updated this week
• int-brain-lab / mtscomp
  Multichannel time series lossless compression in pure Python based on NumPy and zlib
  ☆41Updated 7 months ago
• nel-lab / mesmerize-core
  High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
  ☆70Updated 2 months ago
• alihaydaroglu / suite3d
  Fast, volumetric cell detection. In development.
  ☆20Updated last week
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆46Updated last week
• churchlandlab / ChronicNeuropixels
  Neuropixels case for chronic recordings in freely moving mice.
  ☆19Updated 5 years ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆53Updated 2 years ago
• Whitlock-Group / HERBS
  ☆52Updated last year
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆60Updated this week
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆101Updated 9 months ago
• neuroinformatics-unit / swc-hpc-pose-estimation
  Pose estimation scripts to be run on the SWC HPC cluster
  ☆12Updated last year
• gardner-lab / FinchScope
  Single photon tools for Neuroscience
  ☆36Updated 2 weeks ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆156Updated last month
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆17Updated last year
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆47Updated last year
• petersaj / AP_histology
  Histology processing
  ☆71Updated 2 months ago
• yu-lab-vt / AQuA2
  Activity Quantification and Analysis for molecular spatiotemporal signals
  ☆30Updated 2 months ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated this week
• HarveyLab / mouseVR
  Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
  ☆43Updated last year