Jax implementation of normcorre
☆15Jan 25, 2025Updated last year
Alternatives and similar repositories for jnormcorre
Users that are interested in jnormcorre are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for motion correcting, compressing, demixing and visualizing single cell functional imaging data☆20Updated this week
- Region Of Interest Classification and Tracking☆40Updated this week
- IaC codebase for the NeuroCAAS Platform☆40Dec 15, 2023Updated 2 years ago
- Pre-processing pipeline for widefield data☆13Dec 11, 2020Updated 5 years ago
- Fast, volumetric cell detection. In development.☆25Jul 10, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Oct 19, 2023Updated 2 years ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆18Updated this week
- calcium imaging pipeline tool☆50Aug 18, 2025Updated last year
- A napari plugin to analysis point spread functions.☆11Apr 27, 2026Updated 4 months ago
- ☆12Aug 25, 2021Updated 5 years ago
- One canvas API, multiple backends☆34Aug 23, 2026Updated 2 weeks ago
- A simple GUI for automatic and manual alignment across calcium imaging sessions.☆15Jul 2, 2026Updated 2 months ago
- Neuropixels case for chronic recordings in freely moving mice.☆19Dec 3, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Serial-section automated anatomy extension for ScanImage☆18Aug 29, 2026Updated last week
- Automated and reproducible analysis of multiphoton imaging datasets☆24Aug 10, 2026Updated 3 weeks ago
- Julia implementation of the Belief Propagation algorithm for a few discrete graphical models.☆15Nov 16, 2022Updated 3 years ago
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated 6 months ago
- QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.☆11Jul 21, 2026Updated last month
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Sep 15, 2023Updated 2 years ago
- ☆13Aug 16, 2024Updated 2 years ago
- Hennestad et al. 2022☆23Aug 28, 2026Updated last week
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce…☆26Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆39Aug 4, 2026Updated last month
- visual display and analysis python code for retinotopic mapping of rodent visual cortex☆22Aug 30, 2024Updated 2 years ago
- ☆14Jun 6, 2024Updated 2 years ago
- Pytorch implementation of LocaNMF☆37Feb 17, 2020Updated 6 years ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- ☆22Sep 20, 2019Updated 6 years ago
- A python script editor plugin for napari☆11Jul 8, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- CGH using Phase Retrieval Algorithm for parallel two photon polymerization.☆16May 24, 2020Updated 6 years ago
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Multi-photon quality control tools☆38Updated this week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Apr 23, 2026Updated 4 months ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- ☆36May 19, 2025Updated last year
- NIU website on common software problems and their troubleshooting☆10Jul 14, 2026Updated last month