apasarkar / jnormcorreLinks
Jax implementation of normcorre
☆11Updated 8 months ago
Alternatives and similar repositories for jnormcorre
Users that are interested in jnormcorre are comparing it to the libraries listed below
Sorting:
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆12Updated last year
- motion correction☆17Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Region Of Interest Classification and Tracking☆26Updated this week
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Updated last month
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated last week
- Deconvolution of calcium imaging data☆101Updated 8 months ago
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 7 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- IBL core shared libraries☆63Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆152Updated this week
- Browser-based NWB visualization and DANDI exploration☆60Updated 2 weeks ago
- A modular package to control stimulation and track behaviour☆47Updated 11 months ago
- ☆52Updated last year
- Control and design of two-photon photostimulation experiments☆17Updated last year
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- Calcium imaging inter-session alignment☆13Updated last week
- Fast, volumetric cell detection. In development.☆19Updated 4 months ago
- Neuropixels case for chronic recordings in freely moving mice.☆19Updated 5 years ago
- Calcium Data Extraction and Analysis☆46Updated 2 years ago
- ☆34Updated 5 months ago
- Pytorch implementation of LocaNMF☆36Updated 5 years ago
- Tools for processing 2P recordings☆128Updated 2 years ago
- Serial-section automated anatomy extension for ScanImage☆16Updated 2 months ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆107Updated this week