apasarkar / jnormcorreLinks
Jax implementation of normcorre
☆12Updated 11 months ago
Alternatives and similar repositories for jnormcorre
Users that are interested in jnormcorre are comparing it to the libraries listed below
Sorting:
- motion correction☆17Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆12Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Region Of Interest Classification and Tracking☆27Updated this week
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆33Updated 5 years ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 3 months ago
- Single photon tools for Neuroscience☆36Updated 2 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Control and design of two-photon photostimulation experiments☆17Updated last year
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- Deconvolution of calcium imaging data☆103Updated 11 months ago
- Fast, volumetric cell detection. In development.☆21Updated last month
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆43Updated 9 months ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆15Updated last week
- IBL core shared libraries☆66Updated this week
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last month
- Browser-based NWB visualization and DANDI exploration☆62Updated last month
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 3 weeks ago
- ☆52Updated last year
- A modular package to control stimulation and track behaviour☆47Updated last year
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- Neuropixels case for chronic recordings in freely moving mice.☆19Updated 6 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last month
- Activity Quantification and Analysis for molecular spatiotemporal signals☆32Updated last week