NTCColumbia / mocoLinks
motion correction
☆17Updated 2 years ago
Alternatives and similar repositories for moco
Users that are interested in moco are comparing it to the libraries listed below
Sorting:
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- ☆17Updated 2 years ago
- Serial-section automated anatomy extension for ScanImage☆17Updated last month
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Jax implementation of normcorre☆12Updated 10 months ago
- Stream data from PrairieView into MATLAB to allow online processing and analysis☆12Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- ☆41Updated 4 years ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Fast, volumetric cell detection. In development.☆20Updated last month
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Activity Quantification and Analysis for molecular spatiotemporal signals☆32Updated last week
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated 2 weeks ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 3 months ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated last year
- Control and design of two-photon photostimulation experiments☆17Updated last year
- pipeline for volumetric cell segmentation☆13Updated 2 weeks ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Updated 2 years ago
- ☆52Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆82Updated last year
- Region Of Interest Classification and Tracking☆27Updated this week
- ☆34Updated 6 months ago
- Calcium imaging inter-session alignment☆15Updated last week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year